RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 FNTBP49356 437 aa19■□□□□ 0.63
TPM3-220ENST00000509601 MAP3K7CLP57077 242 aa19■□□□□ 0.63
TPM3-220ENST00000509601 PPP2R5DQ14738 602 aa19■□□□□ 0.63
TPM3-220ENST00000509601 GAB4Q2WGN9 574 aa19■□□□□ 0.63
TPM3-220ENST00000509601 PDZD8Q8NEN9 1154 aa19■□□□□ 0.63
TPM3-220ENST00000509601 ATP2A3Q93084 1043 aa19■□□□□ 0.63
TPM3-220ENST00000509601 CYFIP2Q96F07 1278 aa19■□□□□ 0.63
TPM3-220ENST00000509601 NT5C1AQ9BXI3 368 aa19■□□□□ 0.63
TPM3-220ENST00000509601 NIF3L1Q9GZT8 377 aa19■□□□□ 0.63
TPM3-220ENST00000509601 SMPD4Q9NXE4 827 aa19■□□□□ 0.63
TPM3-220ENST00000509601 HHLA1C9JL84 531 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 COCHO43405 550 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 GADD45BO75293 160 aaPredicted RBP18.99■□□□□ 0.63
TPM3-220ENST00000509601 EPB41P11171 864 aaKnown RBP18.99■□□□□ 0.63
TPM3-220ENST00000509601 MBL2P11226 248 aaPredicted RBP18.99■□□□□ 0.63
TPM3-220ENST00000509601 CD58P19256 250 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 DRD1P21728 446 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 ADORA2BP29275 332 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 HOXA6P31267 233 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 FKBP3Q00688 224 aaKnown RBP18.99■□□□□ 0.63
TPM3-220ENST00000509601 HECTD3Q5T447 861 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 ISM2Q6H9L7 571 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 CLEC20AQ6ZU45 233 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 FILIP1Q7Z7B0 1213 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 CD101Q93033 1021 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 TATDN2Q93075 761 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 FAXDC2Q96IV6 333 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 ZFRQ96KR1 1074 aaKnown RBP18.99■□□□□ 0.63
TPM3-220ENST00000509601 IMPG2Q9BZV3 1241 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 POLR3BQ9NW08 1133 aaPredicted RBP18.99■□□□□ 0.63
TPM3-220ENST00000509601 RAB20Q9NX57 234 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 GMIPQ9P107 970 aa18.99■□□□□ 0.63
TPM3-220ENST00000509601 TRIM49BA6NDI0 452 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 CD44P16070 742 aaKnown RBP18.98■□□□□ 0.63
TPM3-220ENST00000509601 OPRD1P41143 372 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 NR1H3Q13133 447 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 GPRIN1Q7Z2K8 1008 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 KIAA2013Q8IYS2 634 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 FBXL13Q8NEE6 735 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 CCSER2Q9H7U1 834 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 CFAP97Q9P2B7 532 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 MAN1B1Q9UKM7 699 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 SMG5Q9UPR3 1016 aaKnown RBP18.98■□□□□ 0.63
TPM3-220ENST00000509601 COQ4Q9Y3A0 265 aa18.98■□□□□ 0.63
TPM3-220ENST00000509601 HELZP42694 1942 aaKnown RBP18.98■□□□□ 0.63
TPM3-220ENST00000509601 DNAH14Q0VDD8 3507 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 MYOFQ9NZM1 2061 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 MYH10P35580 1976 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 DMXL1Q9Y485 3027 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 SCAMP3O14828 347 aaKnown RBP18.97■□□□□ 0.63
TPM3-220ENST00000509601 SLC16A3O15427 465 aaKnown RBP18.97■□□□□ 0.63
TPM3-220ENST00000509601 RNF40O75150 1001 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 NFATC1O95644 943 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 BMP6P22004 513 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 MXI1P50539 228 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 DHCR24Q15392 516 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 CBWD6Q4V339 395 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 CBWD3Q5JTY5 395 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 CBWD5Q5RIA9 395 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 HEATR6Q6AI08 1181 aaKnown RBP18.97■□□□□ 0.63
TPM3-220ENST00000509601 RHBDF2Q6PJF5 856 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 LONP2Q86WA8 852 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 CCDC150Q8NCX0 1101 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 WBP2Q969T9 261 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 TSG101Q99816 390 aa18.97■□□□□ 0.63
TPM3-220ENST00000509601 ANTXRLA6NF34 631 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 STX10O60499 249 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 ATG13O75143 517 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 CYP17A1P05093 508 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 FAM200BP0CF97 657 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 TGM1P22735 817 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 TUBP50607 506 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 LRRC63Q05C16 580 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 SRSF5Q13243 272 aaKnown RBP18.96■□□□□ 0.63
TPM3-220ENST00000509601 FBXO43Q4G163 708 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 ZNF394Q53GI3 561 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 PPP1R26Q5T8A7 1209 aaPredicted RBP18.96■□□□□ 0.63
TPM3-220ENST00000509601 DHTKD1Q96HY7 919 aaPredicted RBP18.96■□□□□ 0.63
TPM3-220ENST00000509601 DUSP16Q9BY84 665 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 GTPBP4Q9BZE4 634 aaKnown RBP18.96■□□□□ 0.63
TPM3-220ENST00000509601 FBXO44Q9H4M3 255 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 OSER1Q9NX31 292 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 HOOK1Q9UJC3 728 aaKnown RBP18.96■□□□□ 0.63
TPM3-220ENST00000509601 SCML2Q9UQR0 700 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 SDK1Q7Z5N4 2213 aa18.96■□□□□ 0.63
TPM3-220ENST00000509601 E2F8A0AVK6 867 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 PPP1R3GB7ZBB8 358 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 K7EQS6 105 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 SLC9A3R1O14745 358 aaPredicted RBP18.95■□□□□ 0.62
TPM3-220ENST00000509601 TBX18O95935 607 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 SLC6A11P48066 632 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 RAD23BP54727 409 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 SLC4A11Q8NBS3 891 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 SLC35C1Q96A29 364 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 HEXIM2Q96MH2 286 aaKnown RBP18.95■□□□□ 0.62
TPM3-220ENST00000509601 ARID3AQ99856 593 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 DUSP9Q99956 384 aaKnown RBP18.95■□□□□ 0.62
TPM3-220ENST00000509601 HINFPQ9BQA5 517 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 NMUR1Q9HB89 426 aa18.95■□□□□ 0.62
TPM3-220ENST00000509601 CISHQ9NSE2 258 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms