RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 GFRA2O00451 464 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 CYB561D2O14569 222 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 CLDN3O15551 220 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 NEMFO60524 1076 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 RPA1P27694 616 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 OXTRP30559 389 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 CSNK1EP49674 416 aaKnown RBP14.6□□□□□ -0.07
HMGCR-208ENST00000509431 EVCP57679 992 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 STRN3Q13033 797 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 DDR2Q16832 855 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 KIF19Q2TAC6 998 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 C9orf57Q5W0N0 161 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 FBXL19Q6PCT2 694 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 CPLX2Q6PUV4 134 aaKnown RBP14.6□□□□□ -0.07
HMGCR-208ENST00000509431 ATG14Q6ZNE5 492 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 USP49Q70CQ1 688 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 ERMNQ8TAM6 284 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 ZNF578Q96N58 590 aaPredicted RBP14.6□□□□□ -0.07
HMGCR-208ENST00000509431 CCSER1Q9C0I3 900 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 OSGEPQ9NPF4 335 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 EIF2B4Q9UI10 523 aaKnown RBP14.6□□□□□ -0.07
HMGCR-208ENST00000509431 SNX11Q9Y5W9 270 aa14.6□□□□□ -0.07
HMGCR-208ENST00000509431 LACTBL1A8MY62 500 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 PIRO00625 290 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 HOXC11O43248 304 aaPredicted RBP14.59□□□□□ -0.07
HMGCR-208ENST00000509431 TULP3O75386 442 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 GRIA4P48058 902 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 LY6G5CQ5SRR4 150 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 EGFLAMQ63HQ2 1017 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 BLOC1S2Q6QNY1 142 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 ZPBP2Q6X784 338 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 MIB1Q86YT6 1006 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 CD302Q8IX05 232 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 DHX40Q8IX18 779 aaKnown RBP14.59□□□□□ -0.07
HMGCR-208ENST00000509431 PYM1Q9BRP8 204 aaKnown RBP14.59□□□□□ -0.07
HMGCR-208ENST00000509431 C17orf75Q9HAS0 396 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 POLD4Q9HCU8 107 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 ITM2CQ9NQX7 267 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 TMLHEQ9NVH6 421 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 HCN2Q9UL51 889 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 ANKRD6Q9Y2G4 727 aa14.59□□□□□ -0.07
HMGCR-208ENST00000509431 ANKRD17O75179 2603 aaKnown RBP14.58□□□□□ -0.08
HMGCR-208ENST00000509431 ANO9A1A5B4 782 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 LAD1O00515 517 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 LDOC1O95751 146 aaPredicted RBP14.58□□□□□ -0.08
HMGCR-208ENST00000509431 CPA1P15085 419 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 CLDN6P56747 220 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 NFATC3Q12968 1075 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 ILKQ13418 452 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 UBAP2LQ14157 1087 aaKnown RBP14.58□□□□□ -0.08
HMGCR-208ENST00000509431 WSCD1Q658N2 575 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 HIC2Q96JB3 615 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 CNDP2Q96KP4 475 aaKnown RBP14.58□□□□□ -0.08
HMGCR-208ENST00000509431 ZFRQ96KR1 1074 aaKnown RBP14.58□□□□□ -0.08
HMGCR-208ENST00000509431 DPH1Q9BZG8 443 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 SLC6A17Q9H1V8 727 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 TRPM5Q9NZQ8 1165 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 SEPT3Q9UH03 358 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 KCNG1Q9UIX4 513 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 CPQQ9Y646 472 aa14.58□□□□□ -0.08
HMGCR-208ENST00000509431 OLFM2O95897 454 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 AFPP02771 609 aaKnown RBP14.57□□□□□ -0.08
HMGCR-208ENST00000509431 ADRB2P07550 413 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 CYP2F1P24903 491 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 MATR3P43243 847 aaKnown RBP eCLIP14.57□□□□□ -0.08
HMGCR-208ENST00000509431 PPP3CCP48454 512 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 ACADVLP49748 655 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 TAF6P49848 677 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 ZNF132P52740 706 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 ORC1Q13415 861 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 EARS2Q5JPH6 523 aaKnown RBP14.57□□□□□ -0.08
HMGCR-208ENST00000509431 C6orf132Q5T0Z8 1188 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 XKR5Q6UX68 686 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 NAF1Q96HR8 494 aaKnown RBP14.57□□□□□ -0.08
HMGCR-208ENST00000509431 CEP295NLQ96MC4 621 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 ACOX2Q99424 681 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 NUP58Q9BVL2 599 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 BHMT2Q9H2M3 363 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 KCNK4Q9NYG8 393 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 EHD2Q9NZN4 543 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 CFAP97Q9P2B7 532 aa14.57□□□□□ -0.08
HMGCR-208ENST00000509431 H0Y8X5 98 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 TRIM66O15016 1216 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 IGLV3-19P01714 112 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 GLDCP23378 1020 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 CCR10P46092 362 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 STARD3Q14849 445 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 CFAP221Q4G0U5 840 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 C4orf17Q53FE4 359 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 GRAMD4Q6IC98 578 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 LSMEM2Q8N112 164 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 NAT16Q8N8M0 369 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 SCFD1Q8WVM8 642 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 KCNE4Q8WWG9 221 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 RFFLQ8WZ73 363 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 FUBP3Q96I24 572 aaKnown RBP eCLIP14.56□□□□□ -0.08
HMGCR-208ENST00000509431 JAKMIP1Q96N16 626 aaKnown RBP14.56□□□□□ -0.08
HMGCR-208ENST00000509431 ACBD6Q9BR61 282 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 CLCA2Q9UQC9 943 aa14.56□□□□□ -0.08
HMGCR-208ENST00000509431 DERAQ9Y315 318 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms