RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 SNRNP35Q16560 246 aaKnown RBP15.53■□□□□ 0.08
HMGCL-208ENST00000509389 HS1BP3Q53T59 392 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 NAIF1Q69YI7 327 aaPredicted RBP15.53■□□□□ 0.08
HMGCL-208ENST00000509389 CEP68Q76N32 757 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 TRAPPC11Q7Z392 1133 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 FAM160A2Q8N612 972 aaPredicted RBP15.53■□□□□ 0.08
HMGCL-208ENST00000509389 ARL14EPQ8N8R7 260 aaPredicted RBP15.53■□□□□ 0.08
HMGCL-208ENST00000509389 RDH13Q8NBN7 331 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 ANKRD20A12PQ8NF67 263 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 RTKNQ9BST9 563 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 ECT2Q9H8V3 914 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 SEMA4GQ9NTN9 838 aa15.53■□□□□ 0.08
HMGCL-208ENST00000509389 DUS2Q9NX74 493 aaKnown RBP15.53■□□□□ 0.08
HMGCL-208ENST00000509389 C2orf78A6NCI8 922 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 CETN3O15182 167 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 CLIC2O15247 247 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 MAPK13O15264 365 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 ATG13O75143 517 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 RNF40O75150 1001 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 CST3P01034 146 aaPredicted RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 TPM3P06753 285 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 DLATP10515 647 aaKnown RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 BDNFP23560 247 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 RPL13P26373 211 aaKnown RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 GJA4P35212 333 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 PXNP49023 591 aaPredicted RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 MAPRE1Q15691 268 aaKnown RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 CSRP2Q16527 193 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 MAN2A1Q16706 1144 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 VSTM1Q6UX27 236 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 CPA6Q8N4T0 437 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 TTC16Q8NEE8 873 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 OSCP1Q8WVF1 389 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 SPATA17Q96L03 361 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 MMS19Q96T76 1030 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 P2RY13Q9BPV8 354 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 MRPL45Q9BRJ2 306 aaKnown RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
HMGCL-208ENST00000509389 IMPACTQ9P2X3 320 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 SLC8A2Q9UPR5 921 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 NME7Q9Y5B8 376 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 WNT6Q9Y6F9 365 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 EML5Q05BV3 1969 aa15.52■□□□□ 0.08
HMGCL-208ENST00000509389 MYO16Q9Y6X6 1858 aa15.52■□□□□ 0.07
HMGCL-208ENST00000509389 A0A1W2PQC6 194 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 DCDC2BA2VCK2 349 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 AKAP3O75969 853 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 HDCP19113 662 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 TNNI1P19237 187 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 DRD1P21728 446 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 GRIK1P39086 918 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 IFNAR2P48551 515 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 CYP2J2P51589 502 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 USP46P62068 366 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 CYP27A1Q02318 531 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 ENPEPQ07075 957 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 TBX2Q13207 712 aaPredicted RBP15.51■□□□□ 0.07
HMGCL-208ENST00000509389 ADAM9Q13443 819 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 PSMD6Q15008 389 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 EML3Q32P44 896 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 PRR23CQ6ZRP0 262 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 MYCBPAPQ8TBZ2 947 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 SH3RF2Q8TEC5 729 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 CCDC127Q96BQ5 260 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 PCED1BQ96HM7 432 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 CGRRF1Q99675 332 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 KIAA1549LQ6ZVL6 1849 aa15.51■□□□□ 0.07
HMGCL-208ENST00000509389 CCDC163A0A0D9SF12 145 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.5■□□□□ 0.07
HMGCL-208ENST00000509389 TEX33O43247 280 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 TACC1O75410 805 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 TCF3P15923 654 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 ANXA13P27216 316 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 GNL1P36915 607 aaPredicted RBP15.5■□□□□ 0.07
HMGCL-208ENST00000509389 CYP24A1Q07973 514 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 FILIP1LQ4L180 1135 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 MDH1BQ5I0G3 518 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 DENND5BQ6ZUT9 1274 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 NETO1Q8TDF5 533 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 GAB3Q8WWW8 586 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 EZH1Q92800 747 aaPredicted RBP15.5■□□□□ 0.07
HMGCL-208ENST00000509389 ATP2A3Q93084 1043 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 EXOC4Q96A65 974 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 EEF2KMTQ96G04 330 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 CEP295NLQ96MC4 621 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 ERGIC2Q96RQ1 377 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 FNBP1Q96RU3 617 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 LINC00597Q9H2U6 94 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 SNX25Q9H3E2 840 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 METTL14Q9HCE5 456 aaKnown RBP15.5■□□□□ 0.07
HMGCL-208ENST00000509389 ARHGAP26Q9UNA1 814 aa15.5■□□□□ 0.07
HMGCL-208ENST00000509389 SLC30A4O14863 429 aa15.49■□□□□ 0.07
HMGCL-208ENST00000509389 RPP40O75818 363 aaKnown RBP15.49■□□□□ 0.07
HMGCL-208ENST00000509389 FAM163BP0C2L3 166 aa15.49■□□□□ 0.07
HMGCL-208ENST00000509389 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
HMGCL-208ENST00000509389 CASP4P49662 377 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms