RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 AMOTQ4VCS5 1084 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 DENND2CQ68D51 928 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 RFX8Q6ZV50 586 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 CAND1Q86VP6 1230 aaKnown RBP2.73□□□□□ -1.97
XRCC4-204ENST00000509268 FAM90A1Q86YD7 464 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 AMOTL1Q8IY63 956 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 BCAS4Q8TDM0 211 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 WIPF2Q8TF74 440 aaPredicted RBP2.73□□□□□ -1.97
XRCC4-204ENST00000509268 JPH3Q8WXH2 748 aaPredicted RBP2.73□□□□□ -1.97
XRCC4-204ENST00000509268 PRR25Q96S07 402 aa2.73□□□□□ -1.97
XRCC4-204ENST00000509268 EVPLQ92817 2033 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 TRIM75PA6NK02 468 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 M0R3H8 397 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 NDUFS2O75306 463 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 PARNO95453 639 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 APEHP13798 732 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 HSD3B2P26439 372 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 PHKA1P46020 1223 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 POLD2P49005 469 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 TAF6P49848 677 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 COPB1P53618 953 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 SUMO2P61956 95 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 SATB1Q01826 763 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 AWAT1Q58HT5 328 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 EARS2Q5JPH6 523 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 ZNF793Q6ZN11 406 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 DCDC5Q6ZRR9 648 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 LINC01465Q8N7H1 131 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 TAF15Q92804 592 aaKnown RBP eCLIP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 SF3B5Q9BWJ5 86 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 CDCP1Q9H5V8 836 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 RMI1Q9H9A7 625 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 METTL14Q9HCE5 456 aaKnown RBP2.72□□□□□ -1.97
XRCC4-204ENST00000509268 RIPOR2Q9Y4F9 1068 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 WASHC2AQ641Q2 1341 aa2.72□□□□□ -1.97
XRCC4-204ENST00000509268 LOC102724159A0A0B4J2E5 919 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 CES2O00748 559 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 TLX3O43711 291 aaPredicted RBP2.71□□□□□ -1.98
XRCC4-204ENST00000509268 TBC1D4O60343 1298 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 NDUFB8O95169 186 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 UMODP07911 640 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 HOXB2P14652 356 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 LRPAP1P30533 357 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 P2RX3P56373 397 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 PWP2Q15269 919 aaKnown RBP2.71□□□□□ -1.98
XRCC4-204ENST00000509268 DEPDC1Q5TB30 811 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 RAB11FIP4Q86YS3 637 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 IZUMO1Q8IYV9 350 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 ELP5Q8TE02 316 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 C1orf43Q9BWL3 253 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 BRINP2Q9C0B6 783 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 WDCPQ9H6R7 721 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.71□□□□□ -1.98
XRCC4-204ENST00000509268 SHOC2Q9UQ13 582 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 POLHQ9Y253 713 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 NOP58Q9Y2X3 529 aaKnown RBP2.71□□□□□ -1.98
XRCC4-204ENST00000509268 COL4A3BPQ9Y5P4 624 aa2.71□□□□□ -1.98
XRCC4-204ENST00000509268 PLEKHD1A6NEE1 506 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 CCDC154A6NI56 674 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ZNF814B7Z6K7 855 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PSMD9O00233 223 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ENPP3O14638 875 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ZC3H11AO75152 810 aaKnown RBP eCLIP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 CDC45O75419 566 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 EDNRBP24530 442 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 TACR3P29371 465 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 GKP32189 559 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ANAPC15P60006 121 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 LMAN2Q12907 356 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 FAM110CQ1W6H9 321 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 KRTAP24-1Q3LI83 254 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 C3orf36Q3SXR2 165 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 SLC39A5Q6ZMH5 540 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ABRAQ8N0Z2 381 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 CPA6Q8N4T0 437 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 LMO3Q8TAP4 145 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 KAT5Q92993 513 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ZNF556Q9HAH1 456 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PCDH12Q9NPG4 1184 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 TMEM45AQ9NWC5 275 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 TUBD1Q9UJT1 453 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 NOTCH2Q04721 2471 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 K7ESF4 209 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 AKAP10O43572 662 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 USP12O75317 370 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PMPCBO75439 489 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PAPSS2O95340 614 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 SERPINB2P05120 415 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 CSF1RP07333 972 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 CD19P15391 556 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 ATF7P17544 494 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 VIPR2P41587 438 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 DSCR9P59020 149 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 YPEL5P62699 121 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 DSC2Q02487 901 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PPATQ06203 517 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 PLEKHG6Q3KR16 790 aa2.7□□□□□ -1.98
XRCC4-204ENST00000509268 RNF187Q5TA31 235 aaPredicted RBP2.7□□□□□ -1.98
XRCC4-204ENST00000509268 CCDC181Q5TID7 509 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms