RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 LTBP2Q14767 1821 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ZMYM2Q9UBW7 1377 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 CCDC163A0A0D9SF12 145 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 A0A1B0GUA9 196 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 NRDCO43847 1150 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ZNF623O75123 536 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 TOM1L1O75674 476 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 KCNH1O95259 989 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 GCNT3O95395 438 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 LDHAP00338 332 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 FGBP02675 491 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 STAG3L1P0CL83 205 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 GHRP10912 638 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 FGFR1P11362 822 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 RAC2P15153 192 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 CSF2RAP15509 400 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ITGB8P26012 769 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 KIR2DL1P43626 348 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 KIR2DL2P43627 348 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 PPP2R2AP63151 447 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 FAM189BP81408 668 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 PNOCQ13519 176 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 PRPF4BQ13523 1007 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 DCAF4L1Q3SXM0 396 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 L1TD1Q5T7N2 865 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 SLC24A5Q71RS6 500 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 EPM2AIP1Q7L775 607 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 FAM228AQ86W67 206 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 SPPL2CQ8IUH8 684 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 GRAMD1CQ8IYS0 662 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 MYOCDQ8IZQ8 938 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 GUF1Q8N442 669 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 DBF4BQ8NFT6 615 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 PHOSPHO2Q8TCD6 241 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 HERVK_113Q902F9 699 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 BADQ92934 168 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 PGBD4Q96DM1 585 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 SCLYQ96I15 445 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 TSPAN18Q96SJ8 248 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ACO2Q99798 780 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ANP32EQ9BTT0 268 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ELAC1Q9H777 363 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 MINDY3Q9H8M7 445 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 AGO3Q9H9G7 860 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 UBN1Q9NPG3 1134 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 RGS18Q9NS28 235 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 TNFSF13BQ9Y275 285 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 SF3B6Q9Y3B4 125 aaKnown RBP5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 STYXL1Q9Y6J8 313 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 CITO14578 2027 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 UMODL1Q5DID0 1318 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 ADGRA3Q8IWK6 1321 aa5.97□□□□□ -1.45
HMGB1P44-201ENST00000508597 TRAV20A0A0B4J274 112 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 A0A0U1RQF3 1178 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 A0A1W2PPC1 479 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PDXKO00764 312 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PSMA7O14818 248 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CLDN3O15551 220 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CALUO43852 315 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 TSPAN1O60635 241 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CLSTN1O94985 981 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CAVIN2O95810 425 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 AMHP03971 560 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 MCF2P10911 925 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 SYN1P17600 705 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 ARF4P18085 180 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PROZP22891 400 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 RPL13P26373 211 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 NMT1P30419 496 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 HOXA11P31270 313 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CD52P31358 61 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 GRIA2P42262 883 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 KCNJ6P48051 423 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 LIG4P49917 911 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 POU4F1Q01851 419 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 STK4Q13043 487 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 MORC3Q14149 939 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 GPNMBQ14956 572 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC14A2Q15849 920 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 NFIL3Q16649 462 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 KNOP1Q1ED39 458 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 ATF7IP2Q5U623 682 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 TWF2Q6IBS0 349 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 SLC27A1Q6PCB7 646 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 MPZL3Q6UWV2 235 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 DEFB128Q7Z7B8 93 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 KIAA0907Q7Z7F0 614 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 MRPL10Q7Z7H8 261 aaKnown RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CPNE8Q86YQ8 564 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 CD302Q8IX05 232 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 C12orf56Q8IXR9 622 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 SYCP3Q8IZU3 236 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 MLKLQ8NB16 471 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 SCFD1Q8WVM8 642 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PPP1R14AQ96A00 147 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 BICD1Q96G01 975 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 DHTKD1Q96HY7 919 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PTCHD1Q96NR3 888 aa5.96□□□□□ -1.46
HMGB1P44-201ENST00000508597 PPP1R16BQ96T49 567 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms