RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZNF268Q14587 947 aaPredicted RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 HECTD3Q5T447 861 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 SNX30Q5VWJ9 437 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 CCDC186Q7Z3E2 898 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 PIGZQ86VD9 579 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 TTC30AQ86WT1 665 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 YAF2Q8IY57 180 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 CMTM8Q8IZV2 173 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 CELF5Q8N6W0 485 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 MAB21L3Q8N8X9 362 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 ZMIZ2Q8NF64 920 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 ZNF397Q8NF99 534 aaPredicted RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 IPO4Q8TEX9 1081 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 STK32AQ8WU08 396 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 TFAP2BQ92481 460 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 NAA15Q9BXJ9 866 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 EDEM3Q9BZQ6 932 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 NUCKS1Q9H1E3 243 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 GANQ9H2C0 597 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 LHX5Q9H2C1 402 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 TRPC7Q9HCX4 862 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 CD320Q9NPF0 282 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 THG1LQ9NWX6 298 aaKnown RBP9.63□□□□□ -0.87
NUP54-207ENST00000508583 PCDHGC3Q9UN70 934 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
NUP54-207ENST00000508583 DENND4CQ5VZ89 1909 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 NUP210Q8TEM1 1887 aaPredicted RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 ZNF840PA6NDX5 716 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 MOSPD3O75425 235 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 LSM8O95777 96 aaKnown RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 ZBED1O96006 694 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 ABL1P00519 1130 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 SRFP11831 508 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 CYP11B1P15538 503 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 PSMC3P17980 439 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 HDCP19113 662 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 TKTL1P51854 596 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 USP46P62068 366 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 CYP4F8P98187 520 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 PLCB2Q00722 1185 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 APBA1Q02410 837 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 TRIM14Q14142 442 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 NR1I3Q14994 352 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 PKDCCQ504Y2 493 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 FIGNQ5HY92 759 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 RAB41Q5JT25 222 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 FAM78AQ5JUQ0 283 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 DPY19L2P1Q6NXN4 242 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 PPP1R2P3Q6NXS1 205 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 CC2D1AQ6P1N0 951 aaPredicted RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 TRIM72Q6ZMU5 477 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 ARID3BQ8IVW6 561 aaPredicted RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 SCML4Q8N228 414 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 TMEM35BQ8NCS4 154 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 SCAMP5Q8TAC9 235 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 IRGQQ8WZA9 623 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 TRMT61BQ9BVS5 477 aaKnown RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 SYNCQ9H7C4 482 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 NLRC4Q9NPP4 1024 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 ST7Q9NRC1 585 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 OLA1Q9NTK5 396 aaKnown RBP9.62□□□□□ -0.87
NUP54-207ENST00000508583 TDP1Q9NUW8 608 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 TMEM30AQ9NV96 361 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 CLIC5Q9NZA1 410 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 DUSP12Q9UNI6 340 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.62□□□□□ -0.87
NUP54-207ENST00000508583 USP3Q9Y6I4 520 aa9.62□□□□□ -0.87
NUP54-207ENST00000508583 ITIH6Q6UXX5 1313 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 MYO10Q9HD67 2058 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 A0A1W2PQJ5 194 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 HHLA1C9JL84 531 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 TLR5O60602 858 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 TADA3O75528 432 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 ZDHHC11BP0C7U3 371 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 TCF3P15923 654 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 FERP16591 822 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 GJA1P17302 382 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 CLCN1P35523 988 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 KLK7P49862 253 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 JAM2P57087 298 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 ADIGQ0VDE8 80 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 TXNDC8Q6A555 127 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 PM20D1Q6GTS8 502 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 C1orf228Q6PIY5 440 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 PARM1Q6UWI2 310 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 RSRC2Q7L4I2 434 aaKnown RBP9.61□□□□□ -0.87
NUP54-207ENST00000508583 TMEM150AQ86TG1 271 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 SLC47A2Q86VL8 602 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 ZDHHC17Q8IUH5 632 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 MFSD6LQ8IWD5 586 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 ZNF276Q8N554 614 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 RNF214Q8ND24 703 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 UBA3Q8TBC4 463 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 BPIFB1Q8TDL5 484 aa9.61□□□□□ -0.87
NUP54-207ENST00000508583 IRF7Q92985 503 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms