RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 VSIG1Q86XK7 387 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 PALB2Q86YC2 1186 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 APPL2Q8NEU8 664 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 SPATA4Q8NEY3 305 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 NUDT8Q8WV74 236 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 ZNF653Q96CK0 615 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 MYO19Q96H55 970 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 NUP85Q9BW27 656 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 FAM129AQ9BZQ8 928 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 NXF3Q9H4D5 531 aaKnown RBP8.53□□□□□ -1.04
CCSER1-207ENST00000508550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCSER1-207ENST00000508550 KLK14Q9P0G3 267 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 FRRS1LQ9P0K9 344 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
CCSER1-207ENST00000508550 TRIM17Q9Y577 477 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 DOCK5Q9H7D0 1870 aa8.53□□□□□ -1.04
CCSER1-207ENST00000508550 TMEM191CA6NGB0 347 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 PGRMC1O00264 195 aaKnown RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 DDX3YO15523 660 aaKnown RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 HUS1O60921 280 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 ERLIN1O75477 346 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 H2AFXP16104 143 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 DESP17661 470 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 ABCB4P21439 1286 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 FGFR4P22455 802 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 GBP1P32455 592 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 RFC2P35250 354 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 CETN2P41208 172 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 IDH3AP50213 366 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 PEX5P50542 639 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 RWDD2BP57060 319 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 SLC8A3P57103 927 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 MAP9Q49MG5 647 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 TAF3Q5VWG9 929 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 MAATS1Q7Z4T9 603 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 TMEM110Q86TL2 294 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 CDR2LQ86X02 465 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 ANKRD52Q8NB46 1076 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 GSTCDQ8NEC7 633 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 FEZF2Q8TBJ5 459 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 TTC9Q92623 222 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 C18orf25Q96B23 403 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 C18orf8Q96DM3 657 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 ARHGEF26Q96DR7 871 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 ZNF668Q96K58 619 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 ZSWIM1Q9BR11 485 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 FRMD8P1Q9BZ68 369 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 SLITRK6Q9H5Y7 841 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 RSAD1Q9HA92 442 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 PRDM16Q9HAZ2 1276 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 OSGEPQ9NPF4 335 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 PARP2Q9UGN5 583 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 FEZ2Q9UHY8 353 aaPredicted RBP8.52□□□□□ -1.05
CCSER1-207ENST00000508550 COG5Q9UP83 839 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 PTCH2Q9Y6C5 1203 aa8.52□□□□□ -1.05
CCSER1-207ENST00000508550 GOLGA6L10A0A0M3HER8 536 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ARL5CA6NH57 179 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ZNF487B1APH4 448 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 C9IYK1 514 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 KCNK3O14649 394 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 PTGESO14684 152 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ZNF189O75820 626 aaPredicted RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 CXCL10P02778 98 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 GLI1P08151 1106 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 TYMPP19971 482 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 RRM1P23921 792 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 PCSK1P29120 753 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 PTPN7P35236 360 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 PCK1P35558 622 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 GNL1P36915 607 aaPredicted RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 NDST1P52848 882 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 DRG2P55039 364 aaKnown RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 PLCB3Q01970 1234 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 UPP1Q16831 310 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 SOWAHAQ2M3V2 549 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ZNF618Q5T7W0 954 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 NAA35Q5VZE5 725 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 DCLRE1AQ6PJP8 1040 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 AGMOQ6ZNB7 445 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ECHDC2Q86YB7 292 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 RHOT1Q8IXI2 618 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 FAM126BQ8IXS8 530 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 SCML4Q8N228 414 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 DTWD1Q8N5C7 304 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 WDTC1Q8N5D0 677 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 IPO4Q8TEX9 1081 aaKnown RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 SLC35F5Q8WV83 523 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 MCRS1Q96EZ8 462 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 HEXIM2Q96MH2 286 aaKnown RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 MMS19Q96T76 1030 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 HNRNPABQ99729 332 aaKnown RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ELOVL4Q9GZR5 314 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 AGO3Q9H9G7 860 aaKnown RBP8.51□□□□□ -1.05
CCSER1-207ENST00000508550 PNPLA8Q9NP80 782 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 ASNSD1Q9NWL6 643 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 TMEM161AQ9NX61 479 aa8.51□□□□□ -1.05
CCSER1-207ENST00000508550 DDX56Q9NY93 547 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms