RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ZFYVE19Q96K21 471 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 CNOT6LQ96LI5 555 aaKnown RBP21■□□□□ 0.95
SFXN1-209ENST00000508290 THAP9Q9H5L6 903 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 DUS2Q9NX74 493 aaKnown RBP21■□□□□ 0.95
SFXN1-209ENST00000508290 GTSE1Q9NYZ3 720 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 FBXO4Q9UKT5 387 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 OBSL1O75147 1896 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 GREB1Q4ZG55 1949 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 DENND4CQ5VZ89 1909 aa21■□□□□ 0.95
SFXN1-209ENST00000508290 SHISA7A6NL88 538 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 BEST1O76090 585 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 MBD3O95983 291 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 PPP2R5DQ14738 602 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 STILQ15468 1287 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 ENOSF1Q7L5Y1 443 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 LMO3Q8TAP4 145 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 CDK5RAP1Q96SZ6 601 aaKnown RBP20.99■□□□□ 0.95
SFXN1-209ENST00000508290 HESX1Q9UBX0 185 aa20.99■□□□□ 0.95
SFXN1-209ENST00000508290 GTPBP10A4D1E9 387 aaKnown RBP20.98■□□□□ 0.95
SFXN1-209ENST00000508290 HHLA1C9JL84 531 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 H0Y858 1186 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 LEFTY2O00292 366 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 LAMTOR5O43504 91 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 NFATC1O95644 943 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 VDRP11473 427 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 ACO1P21399 889 aaKnown RBP20.98■□□□□ 0.95
SFXN1-209ENST00000508290 KIF11P52732 1056 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 BCAT1P54687 386 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 ZNF528Q3MIS6 628 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 KLHDC10Q6PID8 442 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 CCDC186Q7Z3E2 898 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 ARHGAP18Q8N392 663 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 ZNF276Q8N554 614 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 UBR7Q8N806 425 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 OTUB2Q96DC9 234 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 NACA2Q9H009 215 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 CHRDQ9H2X0 955 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 CYLDQ9NQC7 956 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 HPS4Q9NQG7 708 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 SPATA6Q9NWH7 488 aaPredicted RBP20.98■□□□□ 0.95
SFXN1-209ENST00000508290 GMIPQ9P107 970 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 TBC1D14Q9P2M4 693 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 NDRG2Q9UN36 371 aaKnown RBP20.98■□□□□ 0.95
SFXN1-209ENST00000508290 MTF2Q9Y483 593 aaPredicted RBP20.98■□□□□ 0.95
SFXN1-209ENST00000508290 CPQQ9Y646 472 aa20.98■□□□□ 0.95
SFXN1-209ENST00000508290 KIF26AQ9ULI4 1882 aaPredicted RBP20.97■□□□□ 0.95
SFXN1-209ENST00000508290 MBL2P11226 248 aaPredicted RBP20.97■□□□□ 0.95
SFXN1-209ENST00000508290 TNK2Q07912 1038 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 GOLGA8FQ08AF8 430 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 GOLGA8DPQ0D2H9 430 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 LRMPQ12912 555 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 DPCR1Q3MIW9 517 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 ZC3H14Q6PJT7 736 aaKnown RBP20.97■□□□□ 0.95
SFXN1-209ENST00000508290 RNF38Q9H0F5 515 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 EBF3Q9H4W6 596 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 CLIC5Q9NZA1 410 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 CHORDC1Q9UHD1 332 aaPredicted RBP20.97■□□□□ 0.95
SFXN1-209ENST00000508290 USP3Q9Y6I4 520 aa20.97■□□□□ 0.95
SFXN1-209ENST00000508290 CACNA1HO95180 2353 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 TICRRQ7Z2Z1 1910 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 E2F8A0AVK6 867 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 PROB1E7EW31 1015 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 COCHO43405 550 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 TLR5O60602 858 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 SETSIPP0DME0 302 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 CHRNB1P11230 501 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 CD19P15391 556 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 NBL1P41271 181 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 FZD5Q13467 585 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 EML3Q32P44 896 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 CCDC26Q8TAB7 109 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 RIN3Q8TB24 985 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 FAM126AQ9BYI3 521 aaPredicted RBP20.96■□□□□ 0.95
SFXN1-209ENST00000508290 INTS2Q9H0H0 1204 aaKnown RBP20.96■□□□□ 0.95
SFXN1-209ENST00000508290 SEMA4AQ9H3S1 761 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 ECT2Q9H8V3 914 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 LMAN1LQ9HAT1 526 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 TSPAN16Q9UKR8 245 aa20.96■□□□□ 0.95
SFXN1-209ENST00000508290 XPO1O14980 1071 aaKnown RBP20.95■□□□□ 0.94
SFXN1-209ENST00000508290 ATP5C1P36542 298 aaKnown RBP20.95■□□□□ 0.94
SFXN1-209ENST00000508290 BST2Q10589 180 aaKnown RBP20.95■□□□□ 0.94
SFXN1-209ENST00000508290 GRSF1Q12849 480 aaKnown RBP eCLIP20.95■□□□□ 0.94
SFXN1-209ENST00000508290 TMEM270Q6UE05 265 aa20.95■□□□□ 0.94
SFXN1-209ENST00000508290 GBP6Q6ZN66 633 aa20.95■□□□□ 0.94
SFXN1-209ENST00000508290 RBM43Q6ZSC3 357 aaKnown RBP20.95■□□□□ 0.94
SFXN1-209ENST00000508290 MED15Q96RN5 788 aa20.95■□□□□ 0.94
SFXN1-209ENST00000508290 PCDHB4Q9Y5E5 795 aa20.95■□□□□ 0.94
SFXN1-209ENST00000508290 WNT6Q9Y6F9 365 aa20.95■□□□□ 0.94
SFXN1-209ENST00000508290 MIA3Q5JRA6 1907 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 O00370 1275 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 TRDMT1O14717 391 aaKnown RBP20.94■□□□□ 0.94
SFXN1-209ENST00000508290 RALAP11233 206 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 DRD1P21728 446 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 HOXD11P31277 338 aaPredicted RBP20.94■□□□□ 0.94
SFXN1-209ENST00000508290 MTIF2P46199 727 aaKnown RBP20.94■□□□□ 0.94
SFXN1-209ENST00000508290 SOX9P48436 509 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 CCR3P51677 355 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 MEA1Q16626 185 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 MAN2A1Q16706 1144 aa20.94■□□□□ 0.94
SFXN1-209ENST00000508290 GOLGA7BQ2TAP0 167 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms