RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CSGALNACT1Q8TDX6 532 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 INTS12Q96CB8 462 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC6A18Q96N87 628 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 LLPHQ9BRT6 129 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 EDEM2Q9BV94 578 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SERHL2Q9H4I8 314 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 DENND2DQ9H6A0 471 aaPredicted RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 WDR26Q9H7D7 661 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 CBX8Q9HC52 389 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SARS2Q9NP81 518 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 MAD2L2Q9UI95 211 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 VAV3Q9UKW4 847 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 HIF3AQ9Y2N7 669 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 HNRNPRO43390 633 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 CIDEAO60543 219 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 UBTFL6P0CB48 400 aaPredicted RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 RPA1P27694 616 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 RAC3P60763 192 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ST5P78524 1137 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 TAP2Q03519 686 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 NPRL3Q12980 569 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 BTG3Q14201 252 aaPredicted RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SGO2Q562F6 1265 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ZNF628Q5EBL2 1059 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 FBXO38Q6PIJ6 1188 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 KLHL17Q6TDP4 642 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ARMCX2Q7L311 632 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 SGMS1Q86VZ5 419 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 RFX6Q8HWS3 928 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 PSTKQ8IV42 348 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 NKAIN4Q8IVV8 208 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 USHBP1Q8N6Y0 703 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 CACTINQ8WUQ7 758 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 C11orf24Q96F05 449 aaPredicted RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 OSMRQ99650 979 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 FAM118BQ9BPY3 351 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 MOV10L1Q9BXT6 1211 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 FAM129AQ9BZQ8 928 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 TRIM2Q9C040 744 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 CPNE7Q9UBL6 633 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 AMACRQ9UHK6 382 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 GCC2Q8IWJ2 1684 aa7.88□□□□□ -1.15
PDGFRA-206ENST00000508170 DCDC2CA8MYV0 355 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 TULP2O00295 520 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 DNM1LO00429 736 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 NOP56O00567 594 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 HNRNPDLO14979 420 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 CD3EAPO15446 510 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 EXTL3O43909 919 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 NDST3O95803 873 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 ABCB1P08183 1280 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 CASTP20810 708 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 NME2P22392 152 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 PSMB10P40306 273 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 GARSP41250 739 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 MAP2K6P52564 334 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 RWDD2BP57060 319 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC8A3P57103 927 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 MYL6P60660 151 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 GAS6Q14393 721 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 GPR68Q15743 365 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 SLC5A9Q2M3M2 681 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 COL13A1Q5TAT6 717 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 KANK2Q63ZY3 851 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 ADALQ6DHV7 355 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 MFSD5Q6N075 450 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 TAF8Q7Z7C8 310 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 GRAMD2AQ8IUY3 354 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 PHC2Q8IXK0 858 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 TMEM192Q8IY95 271 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 PHACTR4Q8IZ21 702 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 NPLOC4Q8TAT6 608 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 IFT74Q96LB3 600 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 WRNIP1Q96S55 665 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 ABHD16BQ9H3Z7 469 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 DCTPP1Q9H773 170 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 WDR6Q9NNW5 1121 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 TMOD2Q9NZR1 351 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 GMEB1Q9Y692 573 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 EPRSP07814 1512 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 KDM5BQ9UGL1 1544 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 KPNA7A9QM74 516 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 MYO1FO00160 1098 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 TP73O15350 636 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 PHGDHO43175 533 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 ZW10O43264 779 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 CYTIPO60759 359 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 EGFRP00533 1210 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 TK1P04183 234 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 CYP3A4P08684 503 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 ACAT1P24752 427 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 PTBP1P26599 531 aaKnown RBP eCLIP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 IL13P35225 146 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 CTSOP43234 321 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 METAP1P53582 386 aa7.87□□□□□ -1.15
PDGFRA-206ENST00000508170 ATN1P54259 1190 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms