RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 U2AF1L5P0DN76 240 aaPredicted RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 U2AF1Q01081 240 aaKnown RBP eCLIP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 ZNF268Q14587 947 aaPredicted RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 PPP2R5AQ15172 486 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 INSCQ1MX18 579 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 PLEKHG6Q3KR16 790 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 C3orf38Q5JPI3 329 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 GORABQ5T7V8 394 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 FAM102BQ5T8I3 360 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 BCDIN3DQ7Z5W3 292 aaKnown RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 MICU3Q86XE3 530 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 SFTPA1Q8IWL2 248 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 KIAA0319LQ8IZA0 1049 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 Q8N9P0 234 aaPredicted RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 RSPRY1Q96DX4 576 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 ZBTB45Q96K62 511 aaPredicted RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 ZNF48Q96MX3 618 aaPredicted RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 FYTTD1Q96QD9 318 aaKnown RBP4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 EFHD1Q9BUP0 239 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 VPS16Q9H269 839 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 C1orf112Q9NSG2 853 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 ASIC5Q9NY37 505 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 TPCN1Q9ULQ1 816 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 PAXBP1Q9Y5B6 917 aa4.64□□□□□ -1.67
CBX3P3-201ENST00000508108 CYP2D7A0A087X1C5 515 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 TCRBV5S1A1TA0A578 114 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 TRIM43BA6NCK2 446 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 MBD3L4A6NDZ8 208 aaPredicted RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 MBD3L3A6NE82 208 aaPredicted RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 TMEM232C9JQI7 657 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 MOSPD3O75425 235 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 IGKV2-30P06310 120 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 KLRC1P26715 233 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 EPHA3P29320 983 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 PTDSS1P48651 473 aaKnown RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 COPB1P53618 953 aaKnown RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 LMAN2Q12907 356 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 DAZAP2Q15038 168 aaPredicted RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 PTCHD4Q6ZW05 846 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 PRSS3P2Q8NHM4 247 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 ADAMTS18Q8TE60 1221 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 TRIM43Q96BQ3 446 aaPredicted RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 ZBTB9Q96C00 473 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 CCDC17Q96LX7 622 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 VN1R3Q9BXE9 311 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 FAM204AQ9H8W3 233 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 XPNPEP3Q9NQH7 507 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 ELOVL5Q9NYP7 299 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 DNMT3BQ9UBC3 853 aaKnown RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 L1RE1Q9UN81 338 aa4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 SCAF8Q9UPN6 1271 aaKnown RBP4.63□□□□□ -1.67
CBX3P3-201ENST00000508108 A6NNZ2 444 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 RAB27BO00194 218 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 PPEF2O14830 753 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 DSCR3O14972 297 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 CD3EAPO15446 510 aaKnown RBP4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 CCP110O43303 1012 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 RRP9O43818 475 aaKnown RBP4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 BCAR3O75815 825 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 PIAS2O75928 621 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 HGFP14210 728 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 CREB1P16220 341 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 IL1R2P27930 398 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 UQCRC1P31930 480 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 RPS16P62249 146 aaKnown RBP4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 STK3Q13188 491 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 RABEP1Q15276 862 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 CNGA2Q16280 664 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 Q4G0T1 1027 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 AWAT1Q58HT5 328 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 PPP4R4Q6NUP7 873 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 CCDC149Q6ZUS6 474 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 RAB11FIP4Q86YS3 637 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 FAM118BQ9BPY3 351 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 TRIM5Q9C035 493 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 SNX15Q9NRS6 342 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 TRNAU1APQ9NX07 287 aaKnown RBP4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 TUBA8Q9NY65 449 aaPredicted RBP4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 CHPF2Q9P2E5 772 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 KLHL42Q9P2K6 505 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 AFF4Q9UHB7 1163 aaKnown RBP4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 OGDHLQ9ULD0 1010 aa4.62□□□□□ -1.67
CBX3P3-201ENST00000508108 MT-CO3P00414 261 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 ATP5F1P24539 256 aaPredicted RBP4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 DIO1P49895 249 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 PLCD1P51178 756 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 CACNB3P54284 484 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 TIRAPP58753 221 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 ARHGEF7Q14155 803 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 TRIP6Q15654 476 aaKnown RBP4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 NFE2Q16621 373 aaPredicted RBP4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 PXDC1Q5TGL8 231 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 DENND2CQ68D51 928 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 TMEM65Q6PI78 240 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 MAGEB6Q8N7X4 407 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 JDP2Q8WYK2 163 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 LRTOMTQ8WZ04 291 aa4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 NMD3Q96D46 503 aaKnown RBP4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 DDX20Q9UHI6 824 aaKnown RBP4.61□□□□□ -1.67
CBX3P3-201ENST00000508108 ITGB1BP2Q9UKP3 347 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms