RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 EBF3Q9H4W6 596 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 TMEM30AQ9NV96 361 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 SMPD4Q9NXE4 827 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 GTSE1Q9NYZ3 720 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 GMIPQ9P107 970 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 SCML2Q9UQR0 700 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 SH3BP1Q9Y3L3 701 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 CPQQ9Y646 472 aa16.5■□□□□ 0.23
COL1A1-211ENST00000507689 H0Y858 1186 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 LEFTY2O00292 366 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 BEST1O76090 585 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 OAS1P00973 400 aaKnown RBP16.49■□□□□ 0.23
COL1A1-211ENST00000507689 TCF3P15923 654 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 TARSP26639 723 aaKnown RBP16.49■□□□□ 0.23
COL1A1-211ENST00000507689 CTHP32929 405 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 RPS9P46781 194 aaKnown RBP16.49■□□□□ 0.23
COL1A1-211ENST00000507689 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
COL1A1-211ENST00000507689 USP4Q13107 963 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 ANGPT1Q15389 498 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 ZNF77Q15935 545 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 MAN2A1Q16706 1144 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 EXOC3L4Q17RC7 722 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 GOLGA7BQ2TAP0 167 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 RRAGAQ7L523 313 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 KIAA1958Q8N8K9 716 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 ZMIZ2Q8NF64 920 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 ANKRD20A12PQ8NF67 263 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 LRRC3BQ96PB8 259 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 SLC22A12Q96S37 553 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 IER2Q9BTL4 223 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 UBXN6Q9BZV1 441 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 LRRC4Q9HBW1 653 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 UBE2TQ9NPD8 197 aaPredicted RBP16.49■□□□□ 0.23
COL1A1-211ENST00000507689 ANO10Q9NW15 660 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 IL37Q9NZH6 218 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 TBC1D14Q9P2M4 693 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 PTPRDP23468 1912 aa16.49■□□□□ 0.23
COL1A1-211ENST00000507689 ARNTLO00327 626 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 MED7O43513 233 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 TLR5O60602 858 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 SETSIPP0DME0 302 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 ATP5C1P36542 298 aaKnown RBP16.48■□□□□ 0.23
COL1A1-211ENST00000507689 NHLH1Q02575 133 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 TNK2Q07912 1038 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 BST2Q10589 180 aaKnown RBP16.48■□□□□ 0.23
COL1A1-211ENST00000507689 DGKKQ5KSL6 1271 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 CCDC183Q5T5S1 534 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 SNX30Q5VWJ9 437 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 RSRC2Q7L4I2 434 aaKnown RBP16.48■□□□□ 0.23
COL1A1-211ENST00000507689 C1orf210Q8IVY1 113 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 SIX6OS1Q8N1H7 587 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 GPT2Q8TD30 523 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 FAM83CQ9BQN1 747 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 LMAN1LQ9HAT1 526 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 CFAP97Q9P2B7 532 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 NAGPAQ9UK23 515 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 LSM7Q9UK45 103 aaKnown RBP16.48■□□□□ 0.23
COL1A1-211ENST00000507689 TSPAN16Q9UKR8 245 aa16.48■□□□□ 0.23
COL1A1-211ENST00000507689 FAM92AA1XBS5 289 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 GTPBP10A4D1E9 387 aaKnown RBP16.47■□□□□ 0.23
COL1A1-211ENST00000507689 COCHO43405 550 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 USP8P40818 1118 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 SOX9P48436 509 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 KIF11P52732 1056 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 TCF15Q12870 199 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 STX1AQ16623 288 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 TRIM68Q6AZZ1 485 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
COL1A1-211ENST00000507689 RBBP8NLQ8NC74 664 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-211ENST00000507689 CCDC26Q8TAB7 109 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 GOLGA1Q92805 767 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 TUBGCP2Q9BSJ2 902 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 CRACR2AQ9BSW2 395 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 NAT10Q9H0A0 1025 aaKnown RBP16.47■□□□□ 0.23
COL1A1-211ENST00000507689 RNF38Q9H0F5 515 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 MTF2Q9Y483 593 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-211ENST00000507689 WNT6Q9Y6F9 365 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 KMT2EQ8IZD2 1858 aa16.47■□□□□ 0.23
COL1A1-211ENST00000507689 ZNF638Q14966 1978 aaKnown RBP16.47■□□□□ 0.23
COL1A1-211ENST00000507689 KCNJ18B7U540 433 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 XPO1O14980 1071 aaKnown RBP16.46■□□□□ 0.23
COL1A1-211ENST00000507689 CYP26A1O43174 497 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 OLFM2O95897 454 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 ADH1CP00326 375 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 EEF1GP26641 437 aaKnown RBP16.46■□□□□ 0.23
COL1A1-211ENST00000507689 KCNJ12Q14500 433 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 PON2Q15165 354 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 VWA3BQ502W6 1294 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 C10orf120Q5SQS8 335 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 TRIM65Q6PJ69 517 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 PIGZQ86VD9 579 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 LMO3Q8TAP4 145 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 CLDN23Q96B33 292 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 OTUB2Q96DC9 234 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 CCSER2Q9H7U1 834 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 ECT2Q9H8V3 914 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 DNMT3LQ9UJW3 386 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 STRIP2Q9ULQ0 834 aa16.46■□□□□ 0.23
COL1A1-211ENST00000507689 TICRRQ7Z2Z1 1910 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms