RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 FAXDC2Q96IV6 333 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 TIPINQ9BVW5 301 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 IFIH1Q9BYX4 1025 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 GTPBP4Q9BZE4 634 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 ATP6V0A4Q9HBG4 840 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 JRKLQ9Y4A0 524 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 TARSL2A2RTX5 802 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 DENND3A2RUS2 1198 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 AP1G1O43747 822 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 MYCLP12524 364 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 CYP11B1P15538 503 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 TRIM21P19474 475 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 CAPN3P20807 821 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 CYP2J2P51589 502 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 AFF1P51825 1210 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 BYSLQ13895 437 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 CCDC122Q5T0U0 273 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 LMBRD2Q68DH5 695 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 METTL7BQ6UX53 244 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 GLIS1Q8NBF1 620 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 SECISBP2LQ93073 1101 aaKnown RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 RAB34Q9BZG1 259 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 MMRN2Q9H8L6 949 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 FBXO40Q9UH90 709 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 MYO16Q9Y6X6 1858 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 MACROD2A1Z1Q3 448 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 DCDC2CA8MYV0 355 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 M0R3H8 397 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 PPEF2O14830 753 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 HCRTO43612 131 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 SHOX2O60902 331 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 URI1O94763 535 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 KRT72Q14CN4 511 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 WHAMMP3Q1A5X7 153 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 TCTN1Q2MV58 587 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 OLFML2BQ68BL8 750 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 TNIP3Q96KP6 325 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 POLR3FQ9H1D9 316 aaPredicted RBP6.28□□□□□ -1.4
SCLT1-207ENST00000506233 HOXC10Q9NYD6 342 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 KLHL3Q9UH77 587 aa6.28□□□□□ -1.4
SCLT1-207ENST00000506233 K7ENM7 598 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 P4HA2O15460 535 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 CRTAMO95727 393 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 ASLP04424 464 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 TMEM253P0C7T8 217 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 IGFALSP35858 605 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 CARSP49589 748 aaKnown RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 SNRPFP62306 86 aaKnown RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 TERF2Q15554 542 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 CCL14Q16627 93 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 C2CD6Q53TS8 623 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 SFMBT2Q5VUG0 894 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 DCAF15Q66K64 600 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 FOXR1Q6PIV2 292 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 AHI1Q8N157 1196 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PRELID2Q8N945 189 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PRPF31Q8WWY3 499 aaKnown RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PGBD4Q96DM1 585 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 MAML3Q96JK9 1138 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PDZD7Q9H5P4 517 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 C17orf75Q9HAS0 396 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PGPEP1Q9NXJ5 209 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 NEU3Q9UQ49 428 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 APOBEC2Q9Y235 224 aaKnown RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 COL4A3Q01955 1670 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 DENND4CQ5VZ89 1909 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 LCHNA4D1U4 455 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 GOLGA8CPA6NN73 597 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 KIF2AO00139 706 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 RAD51CO43502 376 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 CALUO43852 315 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 DLX3O60479 287 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 FKBP9O95302 570 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 VDRP11473 427 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 GLULP15104 373 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 NME2P22392 152 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 RECQLP46063 649 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 GSCP56915 257 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 SUMO1P63165 101 aaKnown RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 LAMTOR4Q0VGL1 99 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 EIF4EBP2Q13542 120 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF697Q5TEC3 545 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 C17orf99Q6UX52 265 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 FKBP9P1Q75LS8 142 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 CAVIN3Q969G5 261 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PLPPR2Q96GM1 343 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 AGPAT1Q99943 283 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 TMEM8AQ9HCN3 771 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 DGAT1O75907 488 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 NAMPTP43490 491 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 HSP90AA2PQ14568 343 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 HIF1AQ16665 826 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
SCLT1-207ENST00000506233 TMEM240Q5SV17 173 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 RASAL3Q86YV0 1011 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 FAM114A1Q8IWE2 563 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 PDCL2Q8N4E4 241 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 SHCBP1Q8NEM2 672 aa6.27□□□□□ -1.41
SCLT1-207ENST00000506233 ZBTB9Q96C00 473 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms