RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PTPN1P18031 435 aaKnown RBP8.78□□□□□ -1
SNF8-204ENST00000506104 CSRP1P21291 193 aaKnown RBP8.78□□□□□ -1
SNF8-204ENST00000506104 YWHAQP27348 245 aa8.78□□□□□ -1
SNF8-204ENST00000506104 GRIA2P42262 883 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ASIC1P78348 528 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ZXDBP98169 803 aa8.78□□□□□ -1
SNF8-204ENST00000506104 POU5F1Q01860 360 aaKnown RBP8.78□□□□□ -1
SNF8-204ENST00000506104 GAD2Q05329 585 aa8.78□□□□□ -1
SNF8-204ENST00000506104 BIRC3Q13489 604 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ALCAMQ13740 583 aa8.78□□□□□ -1
SNF8-204ENST00000506104 SURF1Q15526 300 aa8.78□□□□□ -1
SNF8-204ENST00000506104 WDR72Q3MJ13 1102 aa8.78□□□□□ -1
SNF8-204ENST00000506104 SDE2Q6IQ49 451 aa8.78□□□□□ -1
SNF8-204ENST00000506104 FAM171BQ6P995 826 aa8.78□□□□□ -1
SNF8-204ENST00000506104 VSTM1Q6UX27 236 aa8.78□□□□□ -1
SNF8-204ENST00000506104 KIAA1324Q6UXG2 1013 aaKnown RBP8.78□□□□□ -1
SNF8-204ENST00000506104 SCARA5Q6ZMJ2 495 aa8.78□□□□□ -1
SNF8-204ENST00000506104 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
SNF8-204ENST00000506104 RASSF3Q86WH2 238 aa8.78□□□□□ -1
SNF8-204ENST00000506104 DDX42Q86XP3 938 aaKnown RBP eCLIP8.78□□□□□ -1
SNF8-204ENST00000506104 SYT12Q8IV01 421 aa8.78□□□□□ -1
SNF8-204ENST00000506104 NELFCDQ8IXH7 590 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ADGRG2Q8IZP9 1017 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ZNF513Q8N8E2 541 aaPredicted RBP8.78□□□□□ -1
SNF8-204ENST00000506104 IL17RCQ8NAC3 791 aa8.78□□□□□ -1
SNF8-204ENST00000506104 MYCBPAPQ8TBZ2 947 aa8.78□□□□□ -1
SNF8-204ENST00000506104 KBTBD7Q8WVZ9 684 aa8.78□□□□□ -1
SNF8-204ENST00000506104 BHMTQ93088 406 aa8.78□□□□□ -1
SNF8-204ENST00000506104 SPATA17Q96L03 361 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ZNF518BQ9C0D4 1074 aa8.78□□□□□ -1
SNF8-204ENST00000506104 TMEM74BQ9NUR3 256 aa8.78□□□□□ -1
SNF8-204ENST00000506104 HSPBP1Q9NZL4 362 aa8.78□□□□□ -1
SNF8-204ENST00000506104 MBD1Q9UIS9 605 aaPredicted RBP8.78□□□□□ -1
SNF8-204ENST00000506104 KLK13Q9UKR3 277 aa8.78□□□□□ -1
SNF8-204ENST00000506104 CYP8B1Q9UNU6 501 aa8.78□□□□□ -1
SNF8-204ENST00000506104 LHX6Q9UPM6 363 aa8.78□□□□□ -1
SNF8-204ENST00000506104 PCNX2A6NKB5 2137 aa8.78□□□□□ -1
SNF8-204ENST00000506104 ATP8B3O60423 1300 aa8.78□□□□□ -1
SNF8-204ENST00000506104 PTPRJQ12913 1337 aa8.78□□□□□ -1
SNF8-204ENST00000506104 DNAH14Q0VDD8 3507 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 SRRM3A6NNA2 597 aaPredicted RBP8.77□□□□□ -1.01
SNF8-204ENST00000506104 TNFRSF10BO14763 440 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 GABRDO14764 452 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 WARSP23381 471 aaKnown RBP8.77□□□□□ -1.01
SNF8-204ENST00000506104 P2RY2P41231 377 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 CACNA2D1P54289 1103 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 SLC7A9P82251 487 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 MESP2Q0VG99 397 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 STK38Q15208 465 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 DUOXA1Q1HG43 343 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 C8orf34Q49A92 452 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 RHBDF2Q6PJF5 856 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 C19orf48Q6RUI8 117 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 TPGS1Q6ZTW0 290 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 DPH6Q7L8W6 267 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 TRAPPC11Q7Z392 1133 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 CHPFQ8IZ52 775 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 CHCHD4Q8N4Q1 142 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 GLIS3Q8NEA6 775 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 KCNV2Q8TDN2 545 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 SCFD1Q8WVM8 642 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 KCNN1Q92952 543 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 ELMO3Q96BJ8 720 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 DNAJC19Q96DA6 116 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 CCSER2Q9H7U1 834 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 DNAJC17Q9NVM6 304 aaKnown RBP8.77□□□□□ -1.01
SNF8-204ENST00000506104 CALCOCO1Q9P1Z2 691 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 TBC1D14Q9P2M4 693 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 DEC1Q9P2X7 70 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 FBXO2Q9UK22 296 aaPredicted RBP8.77□□□□□ -1.01
SNF8-204ENST00000506104 PLXND1Q9Y4D7 1925 aa8.77□□□□□ -1.01
SNF8-204ENST00000506104 TMEM8BA6NDV4 472 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 GOLGA8CPA6NN73 597 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 MEI4A8MW99 385 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 NEDD8-MDP1E9PL57 170 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 TRIM24O15164 1050 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 COCHO43405 550 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 RTN3O95197 1032 aaPredicted RBP8.76□□□□□ -1.01
SNF8-204ENST00000506104 KIF20AO95235 890 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 TCF3P15923 654 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 MAOBP27338 520 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 TNFRSF4P43489 277 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 PPP3CCP48454 512 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 ZNF33AQ06730 810 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 ORC1Q13415 861 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 GAB4Q2WGN9 574 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 PLEKHG6Q3KR16 790 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 CCDC157Q569K6 752 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 HECTD3Q5T447 861 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
SNF8-204ENST00000506104 GRAMD4Q6IC98 578 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 SLC36A4Q6YBV0 504 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 TRMT11Q7Z4G4 463 aaKnown RBP8.76□□□□□ -1.01
SNF8-204ENST00000506104 WDR49Q8IV35 697 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 BBS7Q8IWZ6 715 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 NUP93Q8N1F7 819 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 MINDY1Q8N5J2 469 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 TRIML1Q8N9V2 468 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 PDZD8Q8NEN9 1154 aa8.76□□□□□ -1.01
SNF8-204ENST00000506104 SCAMP5Q8TAC9 235 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms