RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 DPYSL3Q14195 570 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 PTGISQ16647 500 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 CYP4V2Q6ZWL3 525 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 KLHDC9Q8NEP7 349 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM172AQ8WUF8 416 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 P3H4Q92791 437 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 HAUS1Q96CS2 278 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAF2Q96CS3 445 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 C11orf84Q9BUA3 381 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 DUSP16Q9BY84 665 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 TSPYL2Q9H2G4 693 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 XPNPEP3Q9NQH7 507 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 NINJ2Q9NZG7 142 aa18.05■□□□□ 0.48
TRAPPC11-204ENST00000505676 A0A087WUV0 522 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 CYB561D2O14569 222 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 NR1H3Q13133 447 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 CBLBQ13191 982 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRNP1Q6NT89 227 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 PPP1R21Q6ZMI0 780 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 ARRDC4Q8NCT1 418 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 KHSRPQ92945 711 aaKnown RBP eCLIP18.04■□□□□ 0.482e-7■■■■■ 31.2
TRAPPC11-204ENST00000505676 ACSF2Q96CM8 615 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 PEBP4Q96S96 227 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 DDX23Q9BUQ8 820 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 DPEP3Q9H4B8 488 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 RCOR3Q9P2K3 495 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 LGALS13Q9UHV8 139 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 TMEM88BA6NKF7 163 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 APOL1O14791 398 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 FBXO21O94952 628 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 MAGEA4P43358 317 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 ROR1Q01973 937 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 NOGQ13253 232 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 AUHQ13825 339 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 RASA2Q15283 850 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM43BQ6ZT52 329 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 B4GALNT4Q76KP1 1039 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 PGBD4Q96DM1 585 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 TMEM121Q9BTD3 319 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 NGRNQ9NPE2 291 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.04■□□□□ 0.486e-6■■□□□ 12.6
TRAPPC11-204ENST00000505676 FARP1Q9Y4F1 1045 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 ACTL7BQ9Y614 415 aa18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 TRIP12Q14669 1992 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC11-204ENST00000505676 CDH16O75309 829 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 PDGFRBP09619 1106 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 NPR3P17342 541 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 ADORA2BP29275 332 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 PTK7Q13308 1070 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 DPYSL2Q16555 572 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 ERMARDQ5T6L9 678 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 SLC9A4Q6AI14 798 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 SMC1BQ8NDV3 1235 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 SLC2A14Q8TDB8 520 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM118BQ9BPY3 351 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 FETUBQ9UGM5 382 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 TLDC2A0PJX2 215 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 DAB1O75553 588 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 ACSL3O95573 720 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 RBP3P10745 1247 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 CCDC130P13994 396 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 PTPN1P18031 435 aaKnown RBP18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 NR2C2P49116 596 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 ARL4CP56559 192 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 DYNLT1P63172 113 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 GUCY1A3Q02108 690 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 CCDC142Q17RM4 750 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 C15orf59Q2T9L4 293 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 SCUBE3Q8IX30 993 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 RTP4Q96DX8 246 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 GGA2Q9UJY4 613 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 PTCH2Q9Y6C5 1203 aa18.03■□□□□ 0.48
TRAPPC11-204ENST00000505676 NDUFAB1O14561 156 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 ALOX15BO15296 676 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 PGK1P00558 417 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 IFNB1P01574 187 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 CHRNA1P02708 482 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 LMO2P25791 158 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 HOXD10P28358 340 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 MATKP42679 507 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 XRCC4Q13426 336 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 FAM26DQ5JW98 314 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 TDRPQ86YL5 185 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 PPP1R13LQ8WUF5 828 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 PRCCQ92733 491 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 UROC1Q96N76 676 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 PCDH18Q9HCL0 1135 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 STAP1Q9ULZ2 295 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 GABRQQ9UN88 632 aa18.02■□□□□ 0.48
TRAPPC11-204ENST00000505676 TULP2O00295 520 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 EBAG9O00559 213 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 FAM107AO95990 144 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 CD48P09326 243 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 PCSK1P29120 753 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 PHBP35232 272 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 AIF1P55008 147 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 HDAC4P56524 1084 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 CACNB2Q08289 660 aaPredicted RBP18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 KYNUQ16719 465 aa18.02■□□□□ 0.47
TRAPPC11-204ENST00000505676 MICALCLQ6ZW33 695 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms