RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DDX17Q92841 729 aaKnown RBP3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 SCARF2Q96GP6 870 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 ZNF764Q96H86 408 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 MED15Q96RN5 788 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 FUZQ9BT04 418 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 THUMPD3Q9BV44 507 aaKnown RBP3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 TTYH3Q9C0H2 523 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 KLHL4Q9C0H6 718 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 INTS2Q9H0H0 1204 aaKnown RBP3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 ZCWPW1Q9H0M4 648 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 C2orf40Q9H1Z8 148 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 MMADHCQ9H3L0 296 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 CCDC134Q9H6E4 229 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 ERVMER34-1Q9H9K5 563 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 PLEKHA2Q9HB19 425 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 IL21RQ9HBE5 538 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 PFDN4Q9NQP4 134 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 ALKBH4Q9NXW9 302 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 PLA2G3Q9NZ20 509 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 SLAMF8Q9P0V8 285 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 TBK1Q9UHD2 729 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 TRPS1Q9UHF7 1281 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 ATP11BQ9Y2G3 1177 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 ABCC9O60706 1549 aa3.94□□□□□ -1.78
HMGB1P22-201ENST00000505315 TMEM265A0A087WTH1 108 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 HMX2A2RU54 273 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CCDC69A6NI79 296 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 AGAP14A8MT82 685 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TMEM232C9JQI7 657 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 N4BP3O15049 544 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 DNAJB5O75953 348 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 KIF20AO95235 890 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 PGM3O95394 542 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CER1O95813 267 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 PROCP04070 461 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 GAAP10253 952 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 FOSL1P15407 271 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 ATP5JP18859 108 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 HLA-DPA1P20036 260 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 MST1P26927 711 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 EPHA8P29322 1005 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 NOS3P29474 1203 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TLX1P31314 330 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CRHR1P34998 444 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 MSX2P35548 267 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 BUD31P41223 144 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 ALDH1A3P47895 512 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 MRE11P49959 708 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CLCN2P51788 898 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 PRKAG1P54619 331 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CDH15P55291 814 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 RRP1P56182 461 aaKnown RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 NKX3-2P78367 333 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 IL13RA1P78552 427 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 DUSP2Q05923 314 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 GOLGA8FQ08AF8 430 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TFCP2Q12800 502 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 SF3A3Q12874 501 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 COASYQ13057 564 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 IKZF1Q13422 519 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TRIM29Q14134 588 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CSHL1Q14406 222 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 PUM1Q14671 1186 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 KCNB1Q14721 858 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 E2F5Q15329 346 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 ZNF827Q17R98 1081 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CRB2Q5IJ48 1285 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 AFMIDQ63HM1 303 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 RAB12Q6IQ22 244 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 IYDQ6PHW0 289 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TEPPQ6URK8 271 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 CD300LDQ6UXZ3 194 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 DPP8Q6V1X1 898 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TAS1R1Q7RTX1 841 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 UBE3BQ7Z3V4 1068 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 ADGRG6Q86SQ4 1221 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 SPNS2Q8IVW8 549 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 UNC5BQ8IZJ1 945 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 ARMC10Q8N2F6 343 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 C10orf53Q8N6V4 93 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 SLC17A8Q8NDX2 589 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 Q8NFD4 153 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 UTP15Q8TED0 518 aaKnown RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 PIGOQ8TEQ8 1089 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 ASB11Q8WXH4 323 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TAF4BQ92750 862 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 KRT35Q92764 455 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 KTI12Q96EK9 354 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 SAAL1Q96ER3 474 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 MOGAT1Q96PD6 335 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 EIF3CQ99613 913 aaKnown RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 MYOCQ99972 504 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TTPALQ9BTX7 342 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TINAGL1Q9GZM7 467 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 DNAI2Q9GZS0 605 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 SIK2Q9H0K1 926 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 TTYH1Q9H313 450 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 MROH8Q9H579 483 aa3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 STN1Q9H668 368 aaKnown RBP3.93□□□□□ -1.78
HMGB1P22-201ENST00000505315 OPA3Q9H6K4 179 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms