RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 SYNPOQ8N3V7 929 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 CPA6Q8N4T0 437 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 MLKLQ8NB16 471 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 ZBTB44Q8NCP5 570 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 HNRNPABQ99729 332 aaKnown RBP26.85■■□□□ 1.89
PVT1-201ENST00000504719 ECT2Q9H8V3 914 aa26.85■■□□□ 1.89
PVT1-201ENST00000504719 ARMCX3Q9UH62 379 aaPredicted RBP26.85■■□□□ 1.89
PVT1-201ENST00000504719 FAM92AA1XBS5 289 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 LEFTY2O00292 366 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 TRDMT1O14717 391 aaKnown RBP26.84■■□□□ 1.89
PVT1-201ENST00000504719 MBD3O95983 291 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 CD58P19256 250 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 ADORA2BP29275 332 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 MAP3K7CLP57077 242 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 AMPD2Q01433 879 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 TMEM196Q5HYL7 178 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 TCERG1LQ5VWI1 586 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 SNX30Q5VWJ9 437 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 Q6ZS52 159 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 ATP2A3Q93084 1043 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 FAM126AQ9BYI3 521 aaPredicted RBP26.84■■□□□ 1.89
PVT1-201ENST00000504719 LINC00597Q9H2U6 94 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 CHORDC1Q9UHD1 332 aaPredicted RBP26.84■■□□□ 1.89
PVT1-201ENST00000504719 RWDD2AQ9UIY3 292 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 CPQQ9Y646 472 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 FAM186AA6NE01 2351 aa26.84■■□□□ 1.89
PVT1-201ENST00000504719 ATG2BQ96BY7 2078 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 MYO16Q9Y6X6 1858 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 FAM200BP0CF97 657 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 GJA4P35212 333 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 CXCL12P48061 93 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 SATB1Q01826 763 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 PPP2R5DQ14738 602 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 CBWD6Q4V339 395 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 CBWD3Q5JTY5 395 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 CBWD5Q5RIA9 395 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 KIAA1958Q8N8K9 716 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 ATRIPQ8WXE1 791 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 CYFIP2Q96F07 1278 aa26.83■■□□□ 1.89
PVT1-201ENST00000504719 RIF1Q5UIP0 2472 aaKnown RBP26.83■■□□□ 1.89
PVT1-201ENST00000504719 PTPRZ1P23471 2315 aaPredicted RBP26.82■■□□□ 1.88
PVT1-201ENST00000504719 LILRB5O75023 590 aa26.82■■□□□ 1.88
PVT1-201ENST00000504719 ZDHHC11BP0C7U3 371 aa26.82■■□□□ 1.88
PVT1-201ENST00000504719 GRSF1Q12849 480 aaKnown RBP eCLIP26.82■■□□□ 1.88
PVT1-201ENST00000504719 DPCR1Q3MIW9 517 aa26.82■■□□□ 1.88
PVT1-201ENST00000504719 CCDC40Q4G0X9 1142 aa26.82■■□□□ 1.88
PVT1-201ENST00000504719 FSTL4Q6MZW2 842 aa26.82■■□□□ 1.88
PVT1-201ENST00000504719 METTL14Q9HCE5 456 aaKnown RBP26.82■■□□□ 1.88
PVT1-201ENST00000504719 COQ4Q9Y3A0 265 aa26.82■■□□□ 1.88
PVT1-201ENST00000504719 GALK1P51570 392 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 NRLP54845 237 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 HECTD3Q5T447 861 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 CLEC20AQ6ZU45 233 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 TTC39CQ8N584 583 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 TATDN2Q93075 761 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 SRRTQ9BXP5 876 aaKnown RBP26.81■■□□□ 1.88
PVT1-201ENST00000504719 DNAI2Q9GZS0 605 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 FBXO44Q9H4M3 255 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 SMPD4Q9NXE4 827 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 GMIPQ9P107 970 aa26.81■■□□□ 1.88
PVT1-201ENST00000504719 HHLA1C9JL84 531 aa26.8■■□□□ 1.88
PVT1-201ENST00000504719 PAPSS2O95340 614 aaPredicted RBP26.8■■□□□ 1.88
PVT1-201ENST00000504719 MBL2P11226 248 aaPredicted RBP26.8■■□□□ 1.88
PVT1-201ENST00000504719 NR1H3Q13133 447 aa26.8■■□□□ 1.88
PVT1-201ENST00000504719 SUMF1Q8NBK3 374 aa26.8■■□□□ 1.88
PVT1-201ENST00000504719 SLC35C1Q96A29 364 aa26.8■■□□□ 1.88
PVT1-201ENST00000504719 MED15Q96RN5 788 aa26.8■■□□□ 1.88
PVT1-201ENST00000504719 FBRSL1Q9HCM7 1045 aaKnown RBP26.8■■□□□ 1.88
PVT1-201ENST00000504719 CISHQ9NSE2 258 aa26.8■■□□□ 1.88
PVT1-201ENST00000504719 MYOFQ9NZM1 2061 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 COCHO43405 550 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 NFATC1O95644 943 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 TUBP50607 506 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 ZNF394Q53GI3 561 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 PPP1R26Q5T8A7 1209 aaPredicted RBP26.79■■□□□ 1.88
PVT1-201ENST00000504719 NAIF1Q69YI7 327 aaPredicted RBP26.79■■□□□ 1.88
PVT1-201ENST00000504719 RBM43Q6ZSC3 357 aaKnown RBP26.79■■□□□ 1.88
PVT1-201ENST00000504719 DDX42Q86XP3 938 aaKnown RBP eCLIP26.79■■□□□ 1.88
PVT1-201ENST00000504719 EXOC4Q96A65 974 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 ARID3AQ99856 593 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 P2RY13Q9BPV8 354 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 FAM124BQ9H5Z6 455 aaPredicted RBP26.79■■□□□ 1.88
PVT1-201ENST00000504719 CCSER2Q9H7U1 834 aa26.79■■□□□ 1.88
PVT1-201ENST00000504719 FGFR1OPO95684 399 aaKnown RBP26.78■■□□□ 1.88
PVT1-201ENST00000504719 GNA14O95837 355 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 EGFP01133 1207 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 DRD1P21728 446 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 GPRIN1Q7Z2K8 1008 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 SLC4A11Q8NBS3 891 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 CD101Q93033 1021 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 ZFRQ96KR1 1074 aaKnown RBP26.78■■□□□ 1.88
PVT1-201ENST00000504719 PNPLA8Q9NP80 782 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 C2orf42Q9NWW7 574 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 CFAP97Q9P2B7 532 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 DACH1Q9UI36 760 aa26.78■■□□□ 1.88
PVT1-201ENST00000504719 K7ESF4 209 aa26.77■■□□□ 1.88
PVT1-201ENST00000504719 PGFP49763 221 aa26.77■■□□□ 1.88
PVT1-201ENST00000504719 RAD23BP54727 409 aa26.77■■□□□ 1.88
PVT1-201ENST00000504719 ADGRG2Q8IZP9 1017 aa26.77■■□□□ 1.88
PVT1-201ENST00000504719 TMEM176AQ96HP8 235 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms