RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 MIS12Q9H081 205 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 ZBP1Q9H171 429 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 DMAP1Q9NPF5 467 aaPredicted RBP10.92□□□□□ -0.66
TPM3-217ENST00000504663 ASNSD1Q9NWL6 643 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 IL37Q9NZH6 218 aa10.92□□□□□ -0.66
TPM3-217ENST00000504663 FAM92AA1XBS5 289 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 LINC01553A4QN01 128 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 MYO1FO00160 1098 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 GRAP2O75791 330 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 ATP2A2P16615 1042 aaKnown RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 TCP1P17987 556 aaKnown RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 RPL17P18621 184 aaKnown RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 ATF6P18850 670 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 GPD1P21695 349 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 SLC1A1P43005 524 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 PTPN9P43378 593 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 TKTL1P51854 596 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 ZNF143P52747 638 aaPredicted RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 WHAMMP3Q1A5X7 153 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 C15orf59Q2T9L4 293 aaPredicted RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 C4orf50Q6ZRC1 276 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 ANKS3Q6ZW76 656 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 DCP1BQ8IZD4 617 aaKnown RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 ATAD1Q8NBU5 361 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 MSANTD4Q8NCY6 345 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 RXFP2Q8WXD0 754 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 RIN2Q8WYP3 895 aaPredicted RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 CENPIQ92674 756 aaPredicted RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 NT5C3BQ969T7 300 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 MS4A14Q96JA4 679 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 C8orf48Q96LL4 319 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 PGLYRP2Q96PD5 576 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 RAD9AQ99638 391 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 DDX23Q9BUQ8 820 aaKnown RBP10.91□□□□□ -0.66
TPM3-217ENST00000504663 CARD6Q9BX69 1037 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 DNAI2Q9GZS0 605 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 CARD9Q9H257 536 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 RXFP1Q9HBX9 757 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 SPG21Q9NZD8 308 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 IP6K2Q9UHH9 426 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 INSL6Q9Y581 213 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 PCDHA3Q9Y5H8 950 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 CDY1Q9Y6F8 540 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 SLC4A7Q9Y6M7 1214 aa10.91□□□□□ -0.66
TPM3-217ENST00000504663 CEP290O15078 2479 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 C3orf70A6NLC5 250 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 YJEFN3A6XGL0 299 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 GRXCR1A8MXD5 290 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 MIF4GDA9UHW6 222 aaKnown RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 E7ENQ6 273 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 H7C4K7 107 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 KCNK3O14649 394 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 PSTPIP1O43586 416 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 SOAT2O75908 522 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 FGF18O76093 207 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 ABLIM3O94929 683 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 HAPLN1P10915 354 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 MYOGP15173 224 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 DNAJB1P25685 340 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 PSMA2P25787 234 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 GTF2F1P35269 517 aaKnown RBP eCLIP10.9□□□□□ -0.66
TPM3-217ENST00000504663 PPM1AP35813 382 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 GLUD2P49448 558 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 DNA2P51530 1060 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 SLC5A3P53794 718 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 HDAC4P56524 1084 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 USP46P62068 366 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 EIF4EBP2Q13542 120 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 PIGHQ14442 188 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 SIX1Q15475 284 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 NFE2Q16621 373 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 ATP13A4Q4VNC1 1196 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 SDHAF4Q5VUM1 108 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 DCUN1D2Q6PH85 259 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 VSTM1Q6UX27 236 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 RSRC2Q7L4I2 434 aaKnown RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 SCD5Q86SK9 330 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 SPATA2LQ8IUW3 424 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 GPR65Q8IYL9 337 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 FIBCD1Q8N539 461 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 MYRIPQ8NFW9 859 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 SCAMP5Q8TAC9 235 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 AUTS2Q8WXX7 1259 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 TMEM169Q96HH4 297 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 CFAP57Q96MR6 1250 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 CNPY3Q9BT09 278 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 OXCT2Q9BYC2 517 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 SYNCQ9H7C4 482 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 CNGB3Q9NQW8 809 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 ABI2Q9NYB9 513 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 TTC7AQ9ULT0 858 aaPredicted RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 PCDHB5Q9Y5E4 795 aa10.9□□□□□ -0.66
TPM3-217ENST00000504663 RANBP2P49792 3224 aaKnown RBP10.9□□□□□ -0.66
TPM3-217ENST00000504663 ANAPC1Q9H1A4 1944 aa10.9□□□□□ -0.67
TPM3-217ENST00000504663 CCDC66A2RUB6 948 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 CARNS1A5YM72 827 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 C5orf67F2Z3F1 127 aa10.89□□□□□ -0.67
TPM3-217ENST00000504663 TNRC18O15417 2968 aaPredicted RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 CTIFO43310 598 aaKnown RBP10.89□□□□□ -0.67
TPM3-217ENST00000504663 SPOPO43791 374 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms