RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 KCTD13Q8WZ19 329 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 OVCA2Q8WZ82 227 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 DDX1Q92499 740 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 FGF13Q92913 245 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 ACSF2Q96CM8 615 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 MYADMQ96S97 322 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 TRIM5Q9C035 493 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 LHX5Q9H2C1 402 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 ZMYM5Q9UJ78 669 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 NCANO14594 1321 aa12.56□□□□□ -0.4
PDLIM5-208ENST00000504489 A0A1W2PRU2 124 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 LOC730098B7Z3J9 87 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 TULP2O00295 520 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 NRG2O14511 850 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 TADA3O75528 432 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 CFHP08603 1231 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 LAMP2P13473 410 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 FERP16591 822 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 CEBPBP17676 345 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 DDX6P26196 483 aaKnown RBP eCLIP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 SSTR3P32745 418 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 GPD2P43304 727 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 RPL34P49207 117 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 PDE6CP51160 858 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 ZP2Q05996 745 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 TAF10Q12962 218 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 SPECC1LQ69YQ0 1117 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 PMF1Q6P1K2 205 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 GET4Q7L5D6 327 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 GPRIN1Q7Z2K8 1008 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 VSTM4Q8IW00 320 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 ZDHHC14Q8IZN3 488 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 PDZD8Q8NEN9 1154 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 EPS8L1Q8TE68 723 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 STK32AQ8WU08 396 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 SECISBP2LQ93073 1101 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 FBXO32Q969P5 355 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 SLITRK1Q96PX8 696 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 GCNAQ96QF7 691 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 NUCKS1Q9H1E3 243 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 ATXN3LQ9H3M9 355 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 GDE1Q9NZC3 331 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 EPS15L1Q9UBC2 864 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 NOCTQ9UK39 431 aaKnown RBP12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 CDH7Q9ULB5 785 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 CAPN11Q9UMQ6 739 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 SCML2Q9UQR0 700 aa12.55□□□□□ -0.4
PDLIM5-208ENST00000504489 LRRC53A6NM62 1247 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 C2CD4DB7Z1M9 353 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 GJA1P17302 382 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 PFKLP17858 780 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 CDH5P33151 784 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 ZBED6P86452 979 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 CDR2Q01850 454 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 TRIM14Q14142 442 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 TEAD2Q15562 447 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 ARHGAP15Q53QZ3 475 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 SNX30Q5VWJ9 437 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 CCDC186Q7Z3E2 898 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 IRF2BP2Q7Z5L9 587 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 SCML4Q8N228 414 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 WDTC1Q8N5D0 677 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 ZNF397Q8NF99 534 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 MRPS31Q92665 395 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 SYN2Q92777 582 aaPredicted RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 TASP1Q9H6P5 420 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 TRPM5Q9NZQ8 1165 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 LUC7L2Q9Y383 392 aaKnown RBP12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 MIA3Q5JRA6 1907 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 TICRRQ7Z2Z1 1910 aa12.54□□□□□ -0.4
PDLIM5-208ENST00000504489 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 GYPCP04921 128 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 MMEP08473 750 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 ZDHHC11BP0C7U3 371 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 CHRNB2P17787 502 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 WEE1P30291 646 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 PRKCIP41743 596 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 ACADSBP45954 432 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 ZNF75DP51815 510 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 TKTL1P51854 596 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 ARID5AQ03989 594 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 GPR158Q5T848 1215 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 TRIM72Q6ZMU5 477 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 MON1AQ86VX9 555 aa12.53□□□□□ -0.4
PDLIM5-208ENST00000504489 TMEM35BQ8NCS4 154 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms