RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 OAS1P00973 400 aaKnown RBP23.36■■□□□ 1.33
LSM6-203ENST00000503982 CCDC192P0DO97 292 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 HOXC13P31276 330 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 SEC13P55735 322 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 SPEM2Q0P670 501 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 NFIL3Q16649 462 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 RSPO4Q2I0M5 234 aaPredicted RBP23.36■■□□□ 1.33
LSM6-203ENST00000503982 HECTD3Q5T447 861 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 OVCA2Q8WZ82 227 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 SH3BP1Q9Y3L3 701 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 KIAA1549LQ6ZVL6 1849 aa23.36■■□□□ 1.33
LSM6-203ENST00000503982 FAM200BP0CF97 657 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 EPB41P11171 864 aaKnown RBP23.35■■□□□ 1.33
LSM6-203ENST00000503982 ASPAP45381 313 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 ZXDBP98169 803 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 C1orf220Q5T0J3 134 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 PAQR9Q6ZVX9 377 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 DGLUCYQ7Z3D6 616 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 FUKQ8N0W3 1084 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 TAS1R2Q8TE23 839 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 HHIPQ96QV1 700 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 TSG101Q99816 390 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 POLR3BQ9NW08 1133 aaPredicted RBP23.35■■□□□ 1.33
LSM6-203ENST00000503982 GMIPQ9P107 970 aa23.35■■□□□ 1.33
LSM6-203ENST00000503982 GPR179Q6PRD1 2367 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 CETN3O15182 167 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 IRF1P10914 325 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 FOXK2Q01167 660 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 PPP3CAQ08209 521 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 ERMP1Q7Z2K6 904 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 C12orf29Q8N999 325 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 CCDC26Q8TAB7 109 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 ACDQ96AP0 544 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 EEF2KMTQ96G04 330 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 SMOQ99835 787 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 FBXO44Q9H4M3 255 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 TMEM8AQ9HCN3 771 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 COMMD8Q9NX08 183 aa23.34■■□□□ 1.33
LSM6-203ENST00000503982 CYP17A1P05093 508 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 RETP07949 1114 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 LMNB2Q03252 620 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 PUM1Q14671 1186 aaKnown RBP eCLIP23.33■■□□□ 1.33
LSM6-203ENST00000503982 TCERG1LQ5VWI1 586 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 CRYBG2Q8N1P7 616 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 NT5C1AQ9BXI3 368 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 NIF3L1Q9GZT8 377 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 CCSER2Q9H7U1 834 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 CYP3A43Q9HB55 503 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 APOBEC3GQ9HC16 384 aaKnown RBP23.33■■□□□ 1.33
LSM6-203ENST00000503982 CDV3Q9UKY7 258 aaKnown RBP23.33■■□□□ 1.33
LSM6-203ENST00000503982 SPAG17Q6Q759 2223 aa23.33■■□□□ 1.33
LSM6-203ENST00000503982 TNFRSF10BO14763 440 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 COCHO43405 550 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 STX10O60499 249 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 RPP40O75818 363 aaKnown RBP23.32■■□□□ 1.32
LSM6-203ENST00000503982 BEST1O76090 585 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 SMC2O95347 1197 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 OLFM2O95897 454 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 DHCR24Q15392 516 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 EDRF1Q3B7T1 1238 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 ZNF394Q53GI3 561 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 DCAF17Q5H9S7 520 aaPredicted RBP23.32■■□□□ 1.32
LSM6-203ENST00000503982 KRT39Q6A163 491 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 CYFIP2Q96F07 1278 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 TLR8Q9NR97 1041 aaKnown RBP23.32■■□□□ 1.32
LSM6-203ENST00000503982 TBC1D14Q9P2M4 693 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 HOOK1Q9UJC3 728 aaKnown RBP23.32■■□□□ 1.32
LSM6-203ENST00000503982 EML5Q05BV3 1969 aa23.32■■□□□ 1.32
LSM6-203ENST00000503982 ADH1CP00326 375 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 HOXA6P31267 233 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 MXI1P50539 228 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 DMC1Q14565 340 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 C2orf27AQ580R0 203 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 TTC30AQ86WT1 665 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 FMR1NBQ8N0W7 255 aaPredicted RBP23.31■■□□□ 1.32
LSM6-203ENST00000503982 ZMIZ2Q8NF64 920 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 SMARCE1Q969G3 411 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 TWNKQ96RR1 684 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 PARD6AQ9NPB6 346 aa23.31■■□□□ 1.32
LSM6-203ENST00000503982 E2F8A0AVK6 867 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 PRR5-ARHGAP8B1AHC4 643 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 AXIN1O15169 862 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 APODP05090 189 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 ADH5P11766 374 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 SDHBP21912 280 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 OPRD1P41143 372 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 ARHGAP8P85298 464 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 ZNF658Q5TYW1 1059 aaPredicted RBP23.3■■□□□ 1.32
LSM6-203ENST00000503982 BTBD8Q5XKL5 378 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 CACNA2D4Q7Z3S7 1137 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 ADGRG2Q8IZP9 1017 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 CAMKK1Q8N5S9 505 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 FAM160A2Q8N612 972 aaPredicted RBP23.3■■□□□ 1.32
LSM6-203ENST00000503982 GAB3Q8WWW8 586 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 ERCC4Q92889 916 aaPredicted RBP23.3■■□□□ 1.32
LSM6-203ENST00000503982 HNRNPABQ99729 332 aaKnown RBP23.3■■□□□ 1.32
LSM6-203ENST00000503982 DMXL1Q9Y485 3027 aa23.3■■□□□ 1.32
LSM6-203ENST00000503982 TLR5O60602 858 aa23.29■■□□□ 1.32
LSM6-203ENST00000503982 APBB3O95704 486 aa23.29■■□□□ 1.32
LSM6-203ENST00000503982 ACO1P21399 889 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms