RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 CCDC43Q96MW1 224 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 TTC1Q99614 292 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 HAUS8Q9BT25 410 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 EHD1Q9H4M9 534 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 DHX33Q9H6R0 707 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 MAGEF1Q9HAY2 307 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 PDLIM7Q9NR12 457 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 FAM114A2Q9NRY5 505 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 INTS13Q9NVM9 706 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 KLHL3Q9UH77 587 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 DNM3Q9UQ16 869 aa10.03□□□□□ -0.8
PDLIM5-207ENST00000503974 C17orf102A2RUQ5 167 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 CNOT3O75175 753 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 C22orf31O95567 290 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 FYNP06241 537 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 CFL1P23528 166 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 HPDP32754 393 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 IFNA8P32881 189 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 EIF2B2P49770 351 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 BCAP31P51572 246 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 NPEPPSP55786 919 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 NAA20P61599 178 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 MRPL28Q13084 256 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 IGSF11Q5DX21 431 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 C10orf62Q5T681 223 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PAPD7Q5XG87 772 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 BTBD8Q5XKL5 378 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 ANKRD33Q7Z3H0 272 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 ITIH5Q86UX2 942 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 C7orf31Q8N865 590 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 RIN3Q8TB24 985 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 MAML1Q92585 1016 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PBKQ96KB5 322 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 SENP6Q9GZR1 1112 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 SCPEP1Q9HB40 452 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 SETD4Q9NVD3 440 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 KCND2Q9NZV8 630 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 DSEQ9UL01 958 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 MKL2Q9ULH7 1088 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PCDHB4Q9Y5E5 795 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 TRIP12Q14669 1992 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 POLR2DO15514 142 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 ICMTO60725 284 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 RNGTTO60942 597 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 MAFO75444 373 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 DGAT1O75907 488 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 CD4P01730 458 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PLA2G4BP0C869 781 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 RBP3P10745 1247 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 GZMAP12544 262 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 SYKP43405 635 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 STILQ15468 1287 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PARP6Q2NL67 630 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 MTERF2Q49AM1 385 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 XKR9Q5GH70 373 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 GDF6Q6KF10 455 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 C4orf22Q6V702 233 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 FAM126BQ8IXS8 530 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 SLC17A8Q8NDX2 589 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 GIPC3Q8TF64 312 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 CEP170P1Q96L14 293 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 TOX2Q96NM4 488 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 ZNF317Q96PQ6 595 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 NUDCD1Q96RS6 583 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PLIN2Q99541 437 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 XPNPEP1Q9NQW7 623 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 KBTBD4Q9NVX7 518 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 COQ6Q9Y2Z9 468 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 PCDHGA11Q9Y5H2 935 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 SAR1BQ9Y6B6 198 aa10.02□□□□□ -0.81
PDLIM5-207ENST00000503974 BRCA2P51587 3418 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 OR5K4A6NMS3 321 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 PFDN6O15212 129 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 MAGEB2O15479 319 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 GAS2O43903 313 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 CHEK2O96017 543 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 PHBP35232 272 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 CBX5P45973 191 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 KPNA1P52294 538 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 CDK18Q07002 472 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 RBL2Q08999 1139 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 WASHC2DQ5SRD0 308 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 ERMARDQ5T6L9 678 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 SPECC1LQ69YQ0 1117 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 RINT1Q6NUQ1 792 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 CNNM4Q6P4Q7 775 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 TMC7Q7Z402 723 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 SH3RF1Q7Z6J0 888 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 ZC3H18Q86VM9 953 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 CPSF7Q8N684 471 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 TRAPPC12Q8WVT3 735 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 DDX50Q9BQ39 737 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 SH2D3AQ9BRG2 576 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 DDX23Q9BUQ8 820 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 HERC2P3Q9BVR0 1158 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 NUP85Q9BW27 656 aa10.01□□□□□ -0.81
PDLIM5-207ENST00000503974 STOML1Q9UBI4 398 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms