RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 RIPK1Q13546 671 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 MTMR2Q13614 643 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CNGA2Q16280 664 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 GPR162Q16538 588 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 FAM133BQ5BKY9 247 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PPP6R3Q5H9R7 873 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 GPAT2Q6NUI2 795 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 USP49Q70CQ1 688 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TMC3Q7Z5M5 1100 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TMPRSS6Q8IU80 811 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 MICALL2Q8IY33 904 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CCDC24Q8N4L8 307 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PDZD8Q8NEN9 1154 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SLC20A1Q8WUM9 679 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CASKIN2Q8WXE0 1202 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 C18orf25Q96B23 403 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ULK4Q96C45 1275 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 MRRFQ96E11 262 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CHAMP1Q96JM3 812 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SLITRK1Q96PX8 696 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PURBQ96QR8 312 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 NUDT12Q9BQG2 462 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 MRPL9Q9BYD2 267 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 DCLK3Q9C098 648 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 NRDE2Q9H7Z3 1164 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 RAB6BQ9NRW1 208 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PCDHGB4Q9UN71 923 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 AP4S1Q9Y587 144 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ASTN2O75129 1339 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SAC3D1A6NKF1 404 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 KBTBD13C9JR72 458 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 POLRMTO00411 1230 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 FSCN2O14926 492 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SLC22A2O15244 555 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 KCNN4O15554 427 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CST8O60676 142 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SUPT3HO75486 399 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ZMYND10O75800 440 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 RTN3O95197 1032 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 MYCNP04198 464 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 COL6A2P12110 1019 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ACAT1P24752 427 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PTGER2P43116 358 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CARSP49589 748 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 NUP107P57740 925 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 GSTA3Q16772 222 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 LVRNQ6Q4G3 990 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 C3orf62Q6ZUJ4 267 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 STK40Q8N2I9 435 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 STK32AQ8WU08 396 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 N4BP2L2Q92802 583 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TMEM176AQ96HP8 235 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TRMOQ9BU70 441 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TLR10Q9BXR5 811 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PORCNQ9H237 461 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 RAD21L1Q9H4I0 556 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ANKZF1Q9H8Y5 726 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ARHGEF38Q9NXL2 777 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 KCNK4Q9NYG8 393 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PTCH2Q9Y6C5 1203 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ATRNL1Q5VV63 1379 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SIGLEC16A6NMB1 481 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SNTNA6NMZ2 147 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SFI1A8K8P3 1242 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF487B1APH4 448 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TMEM114B3SHH9 223 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 FOXN3O00409 490 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ANGPT2O15123 496 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 NVLO15381 856 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 EFCAB14O75071 495 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 DEAF1O75398 565 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 AKAP3O75969 853 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SRP72O76094 671 aaKnown RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 HIST1H2AGP0C0S8 130 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 HIST1H2ADP20671 130 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 GNL1P36915 607 aaPredicted RBP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 GP5P40197 560 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SLCO1A2P46721 670 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 COPAP53621 1224 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 RHBDL3P58872 404 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 RAB15P59190 212 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 DYNLT1P63172 113 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 UBXN2AP68543 259 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PGM5Q15124 567 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 PDPK2PQ6A1A2 396 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 VSIG10LQ86VR7 867 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TDRPQ86YL5 185 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CREG2Q8IUH2 290 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 SLCO2A1Q92959 643 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 DNAJC19Q96DA6 116 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 HES6Q96HZ4 224 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 HIST1H2AHQ96KK5 128 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 CPNE1Q99829 537 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 HIST1H2AJQ99878 128 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 ZNF670Q9BS34 389 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 H2AFJQ9BTM1 129 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 UBXN6Q9BZV1 441 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 TMEM117Q9H0C3 514 aa4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.92□□□□□ -1.62
NDFIP1-202ENST00000503388 DEFB129Q9H1M3 183 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms