RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 AJAP1Q9UKB5 411 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 ARHGAP26Q9UNA1 814 aa19.23■□□□□ 0.67
PDLIM7-209ENST00000503346 GREB1Q4ZG55 1949 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 KRBA1A5PL33 1030 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 LGALS16A8MUM7 142 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 ARNTLO00327 626 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 ZNF263O14978 683 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 CHADO15335 359 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 ABL1P00519 1130 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 TCF3P15923 654 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 GDI1P31150 447 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 PLA2G4AP47712 749 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 SLC7A9P82251 487 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 IQCB1Q15051 598 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 FKBP15Q5T1M5 1219 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 CCDC186Q7Z3E2 898 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 YAF2Q8IY57 180 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 SIX5Q8N196 739 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 UBA3Q8TBC4 463 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 LSM14BQ9BX40 385 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 RNF38Q9H0F5 515 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 ARHGEF3Q9NR81 526 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 TLR8Q9NR97 1041 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 CA14Q9ULX7 337 aa19.22■□□□□ 0.67
PDLIM7-209ENST00000503346 TULP2O00295 520 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 CYP26A1O43174 497 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 CALCAP01258 141 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 USP4Q13107 963 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 ZNF77Q15935 545 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 MEA1Q16626 185 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 ARHGAP29Q52LW3 1261 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 SLC44A4Q53GD3 710 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 HECTD3Q5T447 861 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 IER5LQ5T953 404 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 RIN3Q8TB24 985 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 SLC35F5Q8WV83 523 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 KCTD13Q8WZ19 329 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 NAA15Q9BXJ9 866 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 THG1LQ9NWX6 298 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 FHOD1Q9Y613 1164 aa19.21■□□□□ 0.67
PDLIM7-209ENST00000503346 M0QYV0 167 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 CAVIN2O95810 425 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 PDGFBP01127 241 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 UCHL3P15374 230 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 GNA15P30679 374 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 USP8P40818 1118 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 PGFP49763 221 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 PLCB2Q00722 1185 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 PRKCQQ04759 706 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 MLF2Q15773 248 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 FBXL6Q8N531 539 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 SH3RF2Q8TEC5 729 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 ZNF606Q8WXB4 792 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 SIK3Q9Y2K2 1263 aa19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 NUP210Q8TEM1 1887 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-209ENST00000503346 FOXN3O00409 490 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 COCHO43405 550 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 MED7O43513 233 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 PSEN1P49768 467 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 STARD6P59095 220 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 ZXDBP98169 803 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 MTF1Q14872 753 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 DRAP1Q14919 205 aaPredicted RBP19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 NFKBIBQ15653 356 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 PM20D1Q6GTS8 502 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 SCD5Q86SK9 330 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 FAM71AQ8IYT1 594 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 KIAA1958Q8N8K9 716 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 SECISBP2LQ93073 1101 aaKnown RBP19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 SHDQ96IW2 340 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 FAM83CQ9BQN1 747 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 GANQ9H2C0 597 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 MFSD1Q9H3U5 465 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 CCSER2Q9H7U1 834 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 NMUR1Q9HB89 426 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 LRRC4Q9HBW1 653 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 CBX8Q9HC52 389 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 ACP6Q9NPH0 428 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 CYLDQ9NQC7 956 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 OSER1Q9NX31 292 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 DAAM1Q9Y4D1 1078 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 CPQQ9Y646 472 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 OBSL1O75147 1896 aa19.19■□□□□ 0.66
PDLIM7-209ENST00000503346 PATJQ8NI35 1801 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 A0A1W2PQH9 124 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 THAP12O43422 761 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 TLR5O60602 858 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 KLK7P49862 253 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 TKTL1P51854 596 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 UBXN1Q04323 297 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 RAPGEF1Q13905 1077 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 PMF1Q6P1K2 205 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 SCML4Q8N228 414 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 ZNF276Q8N554 614 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 ZFYVE19Q96K21 471 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 HSFY1Q96LI6 401 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 ERGIC2Q96RQ1 377 aa19.18■□□□□ 0.66
PDLIM7-209ENST00000503346 DDX23Q9BUQ8 820 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms