RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 SLC1A1P43005 524 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 CCT8P50990 548 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 GALK1P51570 392 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 TFAMQ00059 246 aaKnown RBP5.39□□□□□ -1.55
CLDND1-208ENST00000503004 OGDHQ02218 1023 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 ZNF252P-AS1Q0IIN9 211 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 PTP4A2Q12974 167 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 ZNF568Q3ZCX4 644 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 RASIP1Q5U651 963 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 SLFN12LQ6IEE8 588 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 PLEKHA7Q6IQ23 1121 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 CYP4F22Q6NT55 531 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 LBX2Q6XYB7 198 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 CAPN12Q6ZSI9 719 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 GSTA5Q7RTV2 222 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 BPHLQ86WA6 291 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-208ENST00000503004 EFCAB3Q8N7B9 438 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.39□□□□□ -1.55
CLDND1-208ENST00000503004 STK32AQ8WU08 396 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 DNAJC9Q8WXX5 260 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 SLCO2A1Q92959 643 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 SNF8Q96H20 258 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 PPP1R16BQ96T49 567 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 CGRRF1Q99675 332 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 IMPG2Q9BZV3 1241 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 MRPL47Q9HD33 250 aaKnown RBP5.39□□□□□ -1.55
CLDND1-208ENST00000503004 ARHGEF3Q9NR81 526 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 WHRNQ9P202 907 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 SAE1Q9UBE0 346 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-208ENST00000503004 DNPEPQ9ULA0 475 aa5.39□□□□□ -1.55
CLDND1-208ENST00000503004 POLR2AP24928 1970 aaKnown RBP5.39□□□□□ -1.55
CLDND1-208ENST00000503004 IGKV6D-21A0A0A0MT36 114 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TMEM120BA0PK00 339 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 GRXCR2A6NFK2 248 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 SIGLEC16A6NMB1 481 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 B4GALT5O43286 388 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 USP2O75604 605 aaPredicted RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 STAM2O75886 525 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 PIAS1O75925 651 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TTC4O95801 387 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ASS1P00966 412 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 PIGRP01833 764 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ZCCHC18P0CG32 403 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 HSPA8P11142 646 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ITIH2P19823 946 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 CALB2P22676 271 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 MMP8P22894 467 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 BDNFP23560 247 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TUFMP49411 452 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ADARP55265 1226 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 NFX1Q12986 1120 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 PTK6Q13882 451 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 MPP2Q14168 576 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 MRPL58Q14197 206 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TARBP2Q15633 366 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 SMTNL2Q2TAL5 461 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 KCNT1Q5JUK3 1230 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 FAM209AQ5JX71 171 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 LIN9Q5TKA1 542 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 WDR78Q5VTH9 848 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 MFSD7Q6UXD7 560 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 RHPN2Q8IUC4 686 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 APOBEC3FQ8IUX4 373 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TMEM192Q8IY95 271 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TAB3Q8N5C8 712 aaPredicted RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ANKRD42Q8N9B4 389 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 DNERQ8NFT8 737 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 NLGN2Q8NFZ4 835 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 DQX1Q8TE96 717 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 FBF1Q8TES7 1133 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TFAP2BQ92481 460 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 UTP4Q969X6 686 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 NLRP4Q96MN2 994 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 RUNDC3BQ96NL0 473 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TMEM237Q96Q45 408 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 PHOX2BQ99453 314 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 NIFKQ9BYG3 293 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 SYNCQ9H7C4 482 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 C10orf88Q9H8K7 445 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 RNPEPL1Q9HAU8 725 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ETNK1Q9HBU6 452 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 METTL5Q9NRN9 209 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 CISHQ9NSE2 258 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ATAD3AQ9NVI7 634 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 FGFR1OP2Q9NVK5 253 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 GPRC5DQ9NZD1 345 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 NXF1Q9UBU9 619 aaKnown RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ANAPC5Q9UJX4 755 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TTLL3Q9Y4R7 772 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 SNCAIPQ9Y6H5 919 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 COMMD3-BMI1R4GMX3 469 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 LCTP09848 1927 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 SERPINB7O75635 380 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TOM1L1O75674 476 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 TJP3O95049 919 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 KRT19P08727 400 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 PORP16435 677 aaPredicted RBP5.38□□□□□ -1.55
CLDND1-208ENST00000503004 GM2AP17900 193 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 HSD3B2P26439 372 aa5.38□□□□□ -1.55
CLDND1-208ENST00000503004 ICAM3P32942 547 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms