RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TMEM57Q8N5G2 664 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 HTRA1Q92743 480 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 GOLGA1Q92805 767 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 GPR87Q9BY21 358 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 JMJD4Q9H9V9 463 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 G6PC2Q9NQR9 355 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 FSCN3Q9NQT6 498 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 TMEM160Q9NX00 188 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 PPP4R1LQ9P1A2 415 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 EIF2B4Q9UI10 523 aaKnown RBP6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 KCNE5Q9UJ90 142 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 DUSP10Q9Y6W6 482 aa6.04□□□□□ -1.44
HMGB1P3-201ENST00000502802 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZNF536O15090 1300 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 ADM5C9JUS6 153 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 E7EVH7 732 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 FOXS1O43638 330 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 PPP6R2O75170 966 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 LMNAP02545 664 aaKnown RBP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 ELANEP08246 267 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CAPN3P20807 821 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 EPHA3P29320 983 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 ZEB1P37275 1124 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 PDE6CP51160 858 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CCR5P51681 352 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 TIAL1Q01085 375 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CHRNDQ07001 517 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CSHL1Q14406 222 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CD300EQ496F6 205 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 MCTP1Q6DN14 999 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 RINLQ6ZS11 566 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 BBS12Q6ZW61 710 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 TBC1D1Q86TI0 1168 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 FAM109AQ8N4B1 249 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CEP70Q8NHQ1 597 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 SUN3Q8TAQ9 357 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 ATRIPQ8WXE1 791 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CPT1BQ92523 772 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 SNX19Q92543 992 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 HVCN1Q96D96 273 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 TWNKQ96RR1 684 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 WDR24Q96S15 920 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 OSBPL9Q96SU4 736 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 GPR20Q99678 358 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 TTPALQ9BTX7 342 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CHODLQ9H9P2 273 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 UNKLQ9H9P5 680 aaKnown RBP6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 NOD2Q9HC29 1040 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 NDUFAF4Q9P032 175 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 SERTAD3Q9UJW9 196 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 NFU1Q9UMS0 254 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CNTN6Q9UQ52 1028 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 SSX2IPQ9Y2D8 614 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 CHST2Q9Y4C5 530 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 COL15A1P39059 1388 aa6.03□□□□□ -1.44
HMGB1P3-201ENST00000502802 LMTK3Q96Q04 1460 aa6.02□□□□□ -1.44
HMGB1P3-201ENST00000502802 XDHP47989 1333 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 CCDC196A0A1B0GTZ2 297 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 MYADML2A6NDP7 307 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 B4E171 279 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 AGPSO00116 658 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 CYP27B1O15528 508 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 RPS6KA4O75676 772 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 KRT38O76015 456 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 ZFPL1O95159 310 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 ATP1A3P13637 1013 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 RBL1P28749 1068 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 ADORA2AP29274 412 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 CNR2P34972 360 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 TSPAN7P41732 249 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 MAN2A2P49641 1150 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 CDK7P50613 346 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 ADAM17P78536 824 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 TUBB3Q13509 450 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 PKN1Q16512 942 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 MAP3K21Q5TCX8 1036 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 MZT2BQ6NZ67 158 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 Q6ZRM9 215 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 LRRC55Q6ZSA7 311 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 GDF7Q7Z4P5 450 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 SIAH1Q8IUQ4 282 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 ABRAQ8N0Z2 381 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 TMEM132CQ8N3T6 1108 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 TSPYL6Q8N831 410 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 SYT8Q8NBV8 401 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 INO80BQ9C086 356 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 DERAQ9Y315 318 aa6.02□□□□□ -1.45
HMGB1P3-201ENST00000502802 RPP40O75818 363 aaKnown RBP6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 BAIAP3O94812 1187 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 CFIP05156 583 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 SERPINA4P29622 427 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 MCM2P49736 904 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 NR1H2P55055 460 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 CLCA4Q14CN2 919 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 SMAD1Q15797 465 aaKnown RBP6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 L1TD1Q5T7N2 865 aaKnown RBP6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 DEPDC1Q5TB30 811 aa6.01□□□□□ -1.45
HMGB1P3-201ENST00000502802 B3GNTL1Q67FW5 361 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms