RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 SIK2Q9H0K1 926 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 NEUROD4Q9HD90 331 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PGK1P00558 417 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 SPIRE1Q08AE8 756 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 TMEM132BQ14DG7 1078 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 PREPLQ4J6C6 727 aaPredicted RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 UTP15Q8TED0 518 aaKnown RBP11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
AC055713.1-201ENST00000498967 HS6ST1O60243 411 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 SLC2A3P11169 496 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 IREB2P48200 963 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ILF3Q12906 894 aaKnown RBP eCLIP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ATP1A4Q13733 1029 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 MYBPC3Q14896 1274 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 LACTB2Q53H82 288 aaPredicted RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 NAPEPLDQ6IQ20 393 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ANKRD26P1Q6NSI1 321 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 GPALPP1Q8IXQ4 340 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 RPAP1Q9BWH6 1393 aaPredicted RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 C15orf38-AP3S2A0A0A6YYH1 394 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 CES2O00748 559 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 CPA1P15085 419 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 TMEM63BQ5T3F8 832 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 AIF1LQ9BQI0 150 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 MUC3BQ9H195 1237 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 DHFRP00374 187 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 AMPD2Q01433 879 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 POLD3Q15054 466 aaPredicted RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ZBTB6Q15916 424 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 OCLNQ16625 522 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 BMT2Q1RMZ1 405 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 BRINP3Q76B58 766 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 LRRC47Q8N1G4 583 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 MEIOBQ8N635 442 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 TRPC4APQ8TEL6 797 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 PCIF1Q9H4Z3 704 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 CHMP1AQ9HD42 196 aaPredicted RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 GNG14A0A1W2PPG7 69 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 H3BN98 237 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 COPZ1P61923 177 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 OASLQ15646 514 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ATP6AP1LQ52LC2 224 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 C11orf96Q7Z7L8 435 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 DDX17Q92841 729 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 SKA1Q96BD8 255 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 GGA3Q9NZ52 723 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 hCG_1642624A0A1W2PR95 340 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 FAM170AA1A519 330 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 OPLAHO14841 1288 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 GEMIN4P57678 1058 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 OSTNP61366 133 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 EIF5AL1Q6IS14 154 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 TCAIMQ8N3R3 496 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 SCAIQ8N9R8 606 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 OR52L1Q8NGH7 329 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 CNKSR1Q969H4 720 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 TMEM79Q9BSE2 394 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ROGDIQ9GZN7 287 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ENTPD7Q9NQZ7 604 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 PNMA8BQ9ULN7 279 aaPredicted RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 MYO3BQ8WXR4 1341 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 PIK3CBP42338 1070 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 HK2P52789 917 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 ABRQ12979 859 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 NFX1Q12986 1120 aaKnown RBP11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 TSHZ1Q6ZSZ6 1077 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 TMEM26Q6ZUK4 368 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
AC055713.1-201ENST00000498967 VPS26AO75436 327 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ANXA9O76027 345 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ATP5BP06576 529 aaKnown RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 MZF1P28698 734 aaPredicted RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 GJA8P48165 433 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 CDH4P55283 916 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 IL5RAQ01344 420 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 VPS72Q15906 364 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 EEF2KMTQ96G04 330 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 C9orf16Q9BUW7 83 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SNAPC5O75971 98 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 INO80DQ53TQ3 878 aaPredicted RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 FAM173BQ6P4H8 233 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 C10orf107Q8IVU9 208 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 DENND6BQ8NEG7 585 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 OTUD7AQ8TE49 926 aaPredicted RBP11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 HEMGNQ9BXL5 484 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 CST11Q9H112 138 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ABHD10Q9NUJ1 306 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 TBC1D30Q9Y2I9 924 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 ADCY9O60503 1353 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PNMA6EA0A0J9YXQ4 647 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 PDGFRBP09619 1106 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 CALB2P22676 271 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 CNTFP26441 200 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SFNP31947 248 aa11.53□□□□□ -0.56
AC055713.1-201ENST00000498967 SKIV2LQ15477 1246 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms