RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	ARID3A	Q99856	593 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	FAM83C	Q9BQN1	747 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	NACA2	Q9H009	215 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	SMG9	Q9H0W8	520 aa	Known RBP	11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	GKN1	Q9NS71	199 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	TMEM30A	Q9NV96	361 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	SCML2	Q9UQR0	700 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	CCL26	Q9Y258	94 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	ANAPC1	Q9H1A4	1944 aa		11.11	□□□□□ -0.63
FXR1-222	ENST00000498658	C2orf78	A6NCI8	922 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	BEST1	O76090	585 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	OAS1	P00973	400 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	VDR	P11473	427 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	ACO1	P21399	889 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	PLA2G5	P39877	138 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	MTIF2	P46199	727 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	RPS9	P46781	194 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	IFNAR2	P48551	515 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	BCAT1	P54687	386 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	GOLGA8F	Q08AF8	430 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	GOLGA8DP	Q0D2H9	430 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	NR1H3	Q13133	447 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	RUNX3	Q13761	415 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	STIL	Q15468	1287 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	ZNF77	Q15935	545 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	SASS6	Q6UVJ0	657 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	RBM43	Q6ZSC3	357 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	GPIHBP1	Q8IV16	184 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	CPA6	Q8N4T0	437 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	SCAMP5	Q8TAC9	235 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	LMO3	Q8TAP4	145 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	GPT2	Q8TD30	523 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	SH3RF2	Q8TEC5	729 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	OSCP1	Q8WVF1	389 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	ATP2A3	Q93084	1043 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	CLDN23	Q96B33	292 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	FOXQ1	Q9C009	403 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	DUS2	Q9NX74	493 aa	Known RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	RAPGEFL1	Q9UHV5	662 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	PCDHB4	Q9Y5E5	795 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	MUC6	Q6W4X9	2439 aa		11.1	□□□□□ -0.63
FXR1-222	ENST00000498658	MIA3	Q5JRA6	1907 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	TICRR	Q7Z2Z1	1910 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	SPECC1L-ADORA2A	F8WAN1	911 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	DCN	P07585	359 aa	Known RBP	11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	ZDHHC11B	P0C7U3	371 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	MBL2	P11226	248 aa	Predicted RBP	11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	CD19	P15391	556 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	TARS	P26639	723 aa	Known RBP	11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	CTH	P32929	405 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	MFAP3	P55082	362 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	TCF15	Q12870	199 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	USP4	Q13107	963 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	LRRC32	Q14392	662 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	PPP2R5D	Q14738	602 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	MAN2A1	Q16706	1144 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	DGKK	Q5KSL6	1271 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	CCDC183	Q5T5S1	534 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	TMEM270	Q6UE05	265 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	GBP6	Q6ZN66	633 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	ARHGAP18	Q8N392	663 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	UBR7	Q8N806	425 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	PRSS33	Q8NF86	280 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	ZFYVE19	Q96K21	471 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	SLC22A12	Q96S37	553 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	ANO10	Q9NW15	660 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	GTSE1	Q9NYZ3	720 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	GMIP	Q9P107	970 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	DLGAP2	Q9P1A6	1054 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	TBC1D14	Q9P2M4	693 aa		11.09	□□□□□ -0.63
FXR1-222	ENST00000498658	F5	P12259	2224 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	PATJ	Q8NI35	1801 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	HHLA1	C9JL84	531 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	LEFTY2	O00292	366 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	XPO1	O14980	1071 aa	Known RBP	11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	COCH	O43405	550 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	TLR5	O60602	858 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	NFATC1	O95644	943 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	TPM2	P07951	284 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	SETSIP	P0DME0	302 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	RALA	P11233	206 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	CD72	P21854	359 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	EEF1G	P26641	437 aa	Known RBP	11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	ATP5C1	P36542	298 aa	Known RBP	11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	KIF11	P52732	1056 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	NHLH1	Q02575	133 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	BST2	Q10589	180 aa	Known RBP	11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	ANGPT1	Q15389	498 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	CNGA2	Q16280	664 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	EXOC3L4	Q17RC7	722 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	GOLGA7B	Q2TAP0	167 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	KLHDC10	Q6PID8	442 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	TRIM65	Q6PJ69	517 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	MAMSTR	Q6ZN01	415 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	RRAGA	Q7L523	313 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	CCDC186	Q7Z3E2	898 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	IRF2BP1	Q8IU81	584 aa		11.08	□□□□□ -0.64
FXR1-222	ENST00000498658	C1orf210	Q8IVY1	113 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms