RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 DCAF12L1Q5VU92 463 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 ADGRG3Q86Y34 549 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 SPARTQ8N0X7 666 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 RP9Q8TA86 221 aaKnown RBP5.77□□□□□ -1.49
SSR3-209ENST00000498205 OSCP1Q8WVF1 389 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 ATG4AQ8WYN0 398 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 TBC1D5Q92609 795 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 PHKBQ93100 1093 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 ZNF668Q96K58 619 aaPredicted RBP5.77□□□□□ -1.49
SSR3-209ENST00000498205 HAPLN3Q96S86 360 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 FAM83DQ9H4H8 585 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 PNPLA8Q9NP80 782 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 NPC1L1Q9UHC9 1359 aa5.77□□□□□ -1.49
SSR3-209ENST00000498205 RNF17Q9BXT8 1623 aaKnown RBP5.77□□□□□ -1.49
SSR3-209ENST00000498205 AQP7P3A6NL99 342 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 LINC00473A8K010 186 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 CAND2O75155 1236 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 C1RP00736 705 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 PRKCBP05771 671 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 PRKAR1BP31321 381 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 CLK3P49761 638 aaKnown RBP5.76□□□□□ -1.49
SSR3-209ENST00000498205 CCT8P50990 548 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 CCNIQ14094 377 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 SAFBQ15424 915 aaKnown RBP eCLIP5.76□□□□□ -1.49
SSR3-209ENST00000498205 TBC1D25Q3MII6 688 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 RAB11FIP4Q86YS3 637 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 BPIFB1Q8TDL5 484 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 RAPGEF4Q8WZA2 1011 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 SARAFQ96BY9 339 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 SARGQ9BW04 601 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 CXorf36Q9H7Y0 433 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 STK32BQ9NY57 414 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 NUDCQ9Y266 331 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 PARD3Q8TEW0 1356 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 MYO5CQ9NQX4 1742 aa5.76□□□□□ -1.49
SSR3-209ENST00000498205 FER1L4A9Z1Z3 1794 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 CCDC144AA2RUR9 1427 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 KIAA1210Q9ULL0 1709 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 VWC2LB2RUY7 222 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 CSF1RP07333 972 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 FAM163BP0C2L3 166 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 TRIM27P14373 513 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 CD38P28907 300 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 NANOS3P60323 173 aaKnown RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 EIF2B5Q13144 721 aaKnown RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 ARHGEF7Q14155 803 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 SLC29A2Q14542 456 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 AARS2Q5JTZ9 985 aaKnown RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 CCSAPQ6IQ19 270 aaPredicted RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 CEP85Q6P2H3 762 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 FBXO42Q6P3S6 717 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 MZT2AQ6P582 158 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 RD3Q7Z3Z2 195 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 COL23A1Q86Y22 540 aaPredicted RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 ZNF280BQ86YH2 543 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 CCAR1Q8IX12 1150 aaKnown RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 ABRAQ8N0Z2 381 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 BOLLQ8N9W6 283 aaKnown RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 PNISRQ8TF01 805 aaKnown RBP5.75□□□□□ -1.49
SSR3-209ENST00000498205 SOCS4Q8WXH5 440 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 BRIP1Q9BX63 1249 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 TRIM5Q9C035 493 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 COL20A1Q9P218 1284 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 HDAC9Q9UKV0 1011 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 SNX13Q9Y5W8 968 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 CDY1Q9Y6F8 540 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 WNT6Q9Y6F9 365 aa5.75□□□□□ -1.49
SSR3-209ENST00000498205 PLCH2O75038 1416 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 SCAPERQ9BY12 1400 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.74□□□□□ -1.49
SSR3-209ENST00000498205 DEPDC5O75140 1603 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 A1L4Q6 167 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 RHPN2P1A8MT19 583 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 hCG_1984214I3L0E3 225 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 M0R3H8 397 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 PSMD9O00233 223 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TJP3O95049 919 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 IGLV2-14P01704 120 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 IL6RP08887 468 aaPredicted RBP5.74□□□□□ -1.49
SSR3-209ENST00000498205 EBLN1P0CF75 366 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TXNP10599 105 aaKnown RBP5.74□□□□□ -1.49
SSR3-209ENST00000498205 EPHA3P29320 983 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 LIPAP38571 399 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TPTEP56180 551 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 RPS16P62249 146 aaKnown RBP5.74□□□□□ -1.49
SSR3-209ENST00000498205 NHLH1Q02575 133 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 GALEQ14376 348 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TREML2Q5T2D2 321 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TMEM63BQ5T3F8 832 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 PARS2Q7L3T8 475 aaKnown RBP5.74□□□□□ -1.49
SSR3-209ENST00000498205 IZUMO1Q8IYV9 350 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 NGEFQ8N5V2 710 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 OR56A3Q8NH54 315 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 GLG1Q92896 1179 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 PPP2R3CQ969Q6 453 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TIFAQ96CG3 184 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 TRIM36Q9NQ86 728 aa5.74□□□□□ -1.49
SSR3-209ENST00000498205 ARPP21Q9UBL0 812 aaPredicted RBP5.74□□□□□ -1.49
SSR3-209ENST00000498205 MRPS17Q9Y2R5 130 aaKnown RBP5.74□□□□□ -1.49
SSR3-209ENST00000498205 PLA2R1Q13018 1463 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms