RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ENGP17813 658 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 UQCRC1P31930 480 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 CASP5P51878 434 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 ITGA8P53708 1063 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 TBX4P57082 545 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 HTRA4P83105 476 aaPredicted RBP3.46□□□□□ -1.86
RIF1-212ENST00000498041 ZNF543Q08ER8 600 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 PCID2Q5JVF3 399 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 PLAG1Q6DJT9 500 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 CCSAPQ6IQ19 270 aaPredicted RBP3.46□□□□□ -1.86
RIF1-212ENST00000498041 CEP85Q6P2H3 762 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 Q6ZWC4 215 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 SLC29A4Q7RTT9 530 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 RAB11FIP4Q86YS3 637 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 ATP11CQ8NB49 1132 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 ZNF384Q8TF68 577 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 TBC1D5Q92609 795 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 IQCDQ96DY2 449 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 TBCBQ99426 244 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 NAA15Q9BXJ9 866 aaKnown RBP3.46□□□□□ -1.86
RIF1-212ENST00000498041 FSD1LQ9BXM9 530 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 ARNT2Q9HBZ2 717 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 ADAM21Q9UKJ8 722 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 PADI4Q9UM07 663 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 CAPN11Q9UMQ6 739 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 GABRQQ9UN88 632 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 WNT6Q9Y6F9 365 aa3.46□□□□□ -1.86
RIF1-212ENST00000498041 TDRD9Q8NDG6 1382 aaKnown RBP3.46□□□□□ -1.86
RIF1-212ENST00000498041 POM121BA6NF01 834 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 LRRC3CA6NJW4 275 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 JTBO76095 146 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 VNN1O95497 513 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 C1RP00736 705 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 A1BGP04217 495 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 PRIM2P49643 509 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 MTHFSP49914 203 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 GATMP50440 423 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 TIAL1Q01085 375 aaKnown RBP eCLIP3.45□□□□□ -1.86
RIF1-212ENST00000498041 NHLH1Q02575 133 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 STK3Q13188 491 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 MZT2AQ6P582 158 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 AMIGO2Q86SJ2 522 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 CCDC33Q8N5R6 958 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 FANCBQ8NB91 859 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 ABHD11Q8NFV4 315 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 ZNF668Q96K58 619 aaPredicted RBP3.45□□□□□ -1.86
RIF1-212ENST00000498041 ZC3H10Q96K80 434 aaKnown RBP3.45□□□□□ -1.86
RIF1-212ENST00000498041 COLEC11Q9BWP8 271 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 VN1R3Q9BXE9 311 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 INO80BQ9C086 356 aaPredicted RBP3.45□□□□□ -1.86
RIF1-212ENST00000498041 TBC1D23Q9NUY8 699 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 PTGFRNQ9P2B2 879 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 ADAMTS5Q9UNA0 930 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 DRG1Q9Y295 367 aaKnown RBP3.45□□□□□ -1.86
RIF1-212ENST00000498041 CFTRP13569 1480 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 RAPGEF2Q9Y4G8 1499 aa3.45□□□□□ -1.86
RIF1-212ENST00000498041 HMGXB3Q12766 1538 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 FGD5Q6ZNL6 1462 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 FANCD2Q9BXW9 1451 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 TARM1B6A8C7 271 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 MASP2O00187 686 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 AREL1O15033 823 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 HGFP14210 728 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 TSHRP16473 764 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 CD38P28907 300 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 CTGFP29279 349 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 GKP32189 559 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 STT3AP46977 705 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 PGDP52209 483 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 TIRAPP58753 221 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 CYP1B1Q16678 543 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 CCDC142Q17RM4 750 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 KLHDC7AQ5VTJ3 777 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 SUMO4Q6EEV6 95 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 BEND5Q7L4P6 421 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 KRT28Q7Z3Y7 464 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 DPP9Q86TI2 863 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 LIX1LQ8IVB5 337 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 SIRT6Q8N6T7 355 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 VGLL2Q8N8G2 317 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 RNF152Q8N8N0 203 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 ZNF764Q96H86 408 aaPredicted RBP3.44□□□□□ -1.86
RIF1-212ENST00000498041 ZBTB45Q96K62 511 aaPredicted RBP3.44□□□□□ -1.86
RIF1-212ENST00000498041 LENG8Q96PV6 779 aaPredicted RBP3.44□□□□□ -1.86
RIF1-212ENST00000498041 PRR25Q96S07 402 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 ZCWPW1Q9H0M4 648 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 TRIM36Q9NQ86 728 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 STARD7Q9NQZ5 370 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 SH3BP4Q9P0V3 963 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 DNAJB11Q9UBS4 358 aa3.44□□□□□ -1.86
RIF1-212ENST00000498041 ZNF608Q9ULD9 1512 aaPredicted RBP3.44□□□□□ -1.86
RIF1-212ENST00000498041 AQRO60306 1485 aaKnown RBP eCLIP3.43□□□□□ -1.868e-6■■■■□ 23.2
RIF1-212ENST00000498041 A0A1W2PPC4 97 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 CLCA1A8K7I4 914 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 M0R3H8 397 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 AP4M1O00189 453 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 ZNF213O14771 459 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 APOL1O14791 398 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 SNX2O60749 519 aa3.43□□□□□ -1.86
RIF1-212ENST00000498041 PMPCBO75439 489 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms