RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 SRRM3A6NNA2 597 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 K7ESF4 209 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 MSH4O15457 936 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 STBD1O95210 358 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 RHOP08100 348 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 CHRNB1P11230 501 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 FCARP24071 287 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 NOVA1P51513 510 aaKnown RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 MLLT6P55198 1093 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 NUCB1Q02818 461 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 RAB33AQ14088 237 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 HSP90AA2PQ14568 343 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 AXDND1Q5T1B0 1012 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 LRCH2Q5VUJ6 765 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 MIER3Q7Z3K6 550 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 WDR5BQ86VZ2 330 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 LNX1Q8TBB1 728 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 CCDC12Q8WUD4 166 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 DEPDC1BQ8WUY9 529 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 PSPC1Q8WXF1 523 aaKnown RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 ZCCHC14Q8WYQ9 949 aaKnown RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 MCRS1Q96EZ8 462 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 ZMYND12Q9H0C1 365 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 ARRDC1-AS1Q9H2J1 176 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 UNC45AQ9H3U1 944 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 MINDY3Q9H8M7 445 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 ZFP14Q9HCL3 533 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 ZNF334Q9HCZ1 680 aaPredicted RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 C6orf50Q9HD87 102 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 RXFP3Q9NSD7 469 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 HCFC1R1Q9NWW0 138 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 MIOSQ9NXC5 875 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 CNOT6Q9ULM6 557 aaKnown RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 HELZ2Q9BYK8 2649 aaKnown RBP8.39□□□□□ -1.07
VPS45-210ENST00000497638 TICRRQ7Z2Z1 1910 aa8.39□□□□□ -1.07
VPS45-210ENST00000497638 LAMA1P25391 3075 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 TEX51A0A1B0GUA7 166 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 TAF4O00268 1085 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 RGS13O14921 159 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 TSPAN1O60635 241 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 CEBPBP17676 345 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 PSMC3P17980 439 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 RNF4P78317 190 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 NCBP1Q09161 790 aaKnown RBP8.38□□□□□ -1.07
VPS45-210ENST00000497638 LAMTOR4Q0VGL1 99 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 TUSC3Q13454 348 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 SLC14A2Q15849 920 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 SLC5A9Q2M3M2 681 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 DGKKQ5KSL6 1271 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 FAM171A1Q5VUB5 890 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 HEATR6Q6AI08 1181 aaKnown RBP8.38□□□□□ -1.07
VPS45-210ENST00000497638 APOA5Q6Q788 366 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 RNF111Q6ZNA4 994 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 CACNA2D4Q7Z3S7 1137 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 SH2D3AQ9BRG2 576 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 APOL6Q9BWW8 343 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 SGPP1Q9BX95 441 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 EIF2AQ9BY44 585 aaKnown RBP8.38□□□□□ -1.07
VPS45-210ENST00000497638 TRIM6Q9C030 488 aaPredicted RBP8.38□□□□□ -1.07
VPS45-210ENST00000497638 CSRNP2Q9H175 543 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 WASF3Q9UPY6 502 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 HES2Q9Y543 173 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 RBM8AQ9Y5S9 174 aaKnown RBP8.38□□□□□ -1.07
VPS45-210ENST00000497638 MAST4O15021 2626 aa8.38□□□□□ -1.07
VPS45-210ENST00000497638 NBEAQ8NFP9 2946 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 VWA8A3KMH1 1905 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 CCDC163A0A0D9SF12 145 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 OR14I1A6ND48 311 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 SLC22A31A6NKX4 558 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 B8ZZF3 427 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 ZNF197O14709 1029 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 SGSM2O43147 1006 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 ASAP2O43150 1006 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 ADAM12O43184 909 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 PSMD10O75832 226 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 AKAP3O75969 853 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 SRGAP2CP0DJJ0 459 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 PTPN2P17706 415 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 CCNE1P24864 410 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 CHMLP26374 656 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 GNA11P29992 359 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 GDI1P31150 447 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 MPLP40238 635 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 PSMC5P62195 406 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 TAGLNQ01995 201 aaKnown RBP8.37□□□□□ -1.07
VPS45-210ENST00000497638 SPIRE1Q08AE8 756 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 PFKFB3Q16875 520 aaPredicted RBP8.37□□□□□ -1.07
VPS45-210ENST00000497638 FAM78AQ5JUQ0 283 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 ADGRF1Q5T601 910 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 B3GNT9Q6UX72 402 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 ANO5Q75V66 913 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 CEP57Q86XR8 500 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 RNF149Q8NC42 400 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 GSTCDQ8NEC7 633 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 BICD2Q8TD16 824 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 TCP11Q8WWU5 503 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 GAB3Q8WWW8 586 aa8.37□□□□□ -1.07
VPS45-210ENST00000497638 PRPF31Q8WWY3 499 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms