RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 YWHAEP62258 255 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 PLCB2Q00722 1185 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 MTF1Q14872 753 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 RAB41Q5JT25 222 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 GJB7Q6PEY0 223 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 TXNDC11Q6PKC3 985 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 CREBRFQ8IUR6 639 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 ANKRD52Q8NB46 1076 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 TTC8Q8TAM2 541 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 ENOX1Q8TC92 643 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 SH3RF2Q8TEC5 729 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 UBXN6Q9BZV1 441 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 CCSER2Q9H7U1 834 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 NMUR1Q9HB89 426 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 SIX2Q9NPC8 291 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 TSPAN16Q9UKR8 245 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 SCML2Q9UQR0 700 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 MIA3Q5JRA6 1907 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 F5P12259 2224 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 LEFTY2O00292 366 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 STK25O00506 426 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 ABL1P00519 1130 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 PAEPP09466 180 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 VDRP11473 427 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 ARSAP15289 507 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 PON1P27169 355 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 MTIF2P46199 727 aaKnown RBP17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 TUBP50607 506 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 MAN2A1Q16706 1144 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 TPD52L1Q16890 204 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 GOLGA7BQ2TAP0 167 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 SGO2Q562F6 1265 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 CCDC183Q5T5S1 534 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 SCD5Q86SK9 330 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 OSBPL6Q9BZF3 934 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 FBXO44Q9H4M3 255 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 AJAP1Q9UKB5 411 aaPredicted RBP17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 PCDHB4Q9Y5E5 795 aa17.02■□□□□ 0.32
DNMT3A-215ENST00000496570 FAM170BA6NMN3 283 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 SPECC1L-ADORA2AF8WAN1 911 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 GABBR2O75899 941 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 CTHP32929 405 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 PDE6CP51160 858 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 PDE4CQ08493 712 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 CDKAL1Q5VV42 579 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 LCLAT1Q6UWP7 414 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 ZNF852Q6ZMS4 543 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 BHLHA9Q7RTU4 235 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 CCDC186Q7Z3E2 898 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 PIGZQ86VD9 579 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 DTWD2Q8NBA8 298 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 OSCP1Q8WVF1 389 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 CLDN23Q96B33 292 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 TUBGCP2Q9BSJ2 902 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 DNAI2Q9GZS0 605 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 LINC00597Q9H2U6 94 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 NDST4Q9H3R1 872 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 EBF3Q9H4W6 596 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 UBE2TQ9NPD8 197 aaPredicted RBP17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 THG1LQ9NWX6 298 aaKnown RBP17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 KIAA1257Q9ULG3 409 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 NFE2L3Q9Y4A8 694 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 CPQQ9Y646 472 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 WNT6Q9Y6F9 365 aa17.01■□□□□ 0.31
DNMT3A-215ENST00000496570 A0A1W2PQH9 124 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 BECN2A8MW95 431 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 KCNJ18B7U540 433 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 MAN2B1O00754 1011 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 CD19P15391 556 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
DNMT3A-215ENST00000496570 RUNX3Q13761 415 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 KCNJ12Q14500 433 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 EXOC3L4Q17RC7 722 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 EML3Q32P44 896 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 ITPRIPL2Q3MIP1 535 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 VWA3BQ502W6 1294 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 TCP11X2Q5H9J9 407 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 HECTD3Q5T447 861 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 GBP6Q6ZN66 633 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 FAM114A1Q8IWE2 563 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 UBA3Q8TBC4 463 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 FAM3CQ92520 227 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 WBP2Q969T9 261 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 C8orf33Q9H7E9 229 aaPredicted RBP17■□□□□ 0.31
DNMT3A-215ENST00000496570 CYLDQ9NQC7 956 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 SMPD4Q9NXE4 827 aa17■□□□□ 0.31
DNMT3A-215ENST00000496570 WDR3Q9UNX4 943 aaKnown RBP eCLIP17■□□□□ 0.31
DNMT3A-215ENST00000496570 CACNA1HO95180 2353 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 XPO1O14980 1071 aaKnown RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 GREM1O60565 184 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 TBX18O95935 607 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 MBL2P11226 248 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 RFX1P22670 979 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 PLA2G4AP47712 749 aa16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 KPNA1P52294 538 aaPredicted RBP16.99■□□□□ 0.31
DNMT3A-215ENST00000496570 BCAT1P54687 386 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms