RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 TWNKQ96RR1 684 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 SMOQ99835 787 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 RAB20Q9NX57 234 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 CPQQ9Y646 472 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 CACNA1AO00555 2505 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 SPAG17Q6Q759 2223 aa16.65■□□□□ 0.26
HDAC4-213ENST00000496347 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 SLC9A3R1O14745 358 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-213ENST00000496347 ABL1P00519 1130 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 ZDHHC11BP0C7U3 371 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 CD58P19256 250 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 DRD1P21728 446 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 GJA4P35212 333 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 PMS1P54277 932 aaKnown RBP16.64■□□□□ 0.25
HDAC4-213ENST00000496347 SATB1Q01826 763 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 NR1H3Q13133 447 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 FBXO43Q4G163 708 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 HECTD3Q5T447 861 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 TCERG1LQ5VWI1 586 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 ANKRD40Q6AI12 368 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 FSTL4Q6MZW2 842 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 TSSK4Q6SA08 328 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 C12orf29Q8N999 325 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 TTC16Q8NEE8 873 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 ZMIZ2Q8NF64 920 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 SEMA4DQ92854 862 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 DUSP9Q99956 384 aaKnown RBP16.64■□□□□ 0.25
HDAC4-213ENST00000496347 P2RY13Q9BPV8 354 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.64■□□□□ 0.252e-12■■■■■ 298.1
HDAC4-213ENST00000496347 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-213ENST00000496347 MAN1B1Q9UKM7 699 aa16.64■□□□□ 0.25
HDAC4-213ENST00000496347 MBL2P11226 248 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-213ENST00000496347 HOXA6P31267 233 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 MAP3K7CLP57077 242 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 ZXDBP98169 803 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 CBWD6Q4V339 395 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 CBWD3Q5JTY5 395 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 CBWD5Q5RIA9 395 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 CLEC20AQ6ZU45 233 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 SUMF1Q8NBK3 374 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 RUBCNQ92622 972 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 SLC35C1Q96A29 364 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 RNF38Q9H0F5 515 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 METTL14Q9HCE5 456 aaKnown RBP16.63■□□□□ 0.25
HDAC4-213ENST00000496347 SMPD4Q9NXE4 827 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 GMIPQ9P107 970 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 SMG5Q9UPR3 1016 aaKnown RBP16.63■□□□□ 0.25
HDAC4-213ENST00000496347 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 ATG2BQ96BY7 2078 aa16.63■□□□□ 0.25
HDAC4-213ENST00000496347 BICDL2A1A5D9 508 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 COCHO43405 550 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 ATG13O75143 517 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 BEST1O76090 585 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 ADORA2BP29275 332 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 CCDC26Q8TAB7 109 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 CYFIP2Q96F07 1278 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 TLR8Q9NR97 1041 aaKnown RBP16.62■□□□□ 0.25
HDAC4-213ENST00000496347 CISHQ9NSE2 258 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 CFAP97Q9P2B7 532 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 TBC1D14Q9P2M4 693 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 SCML2Q9UQR0 700 aa16.62■□□□□ 0.25
HDAC4-213ENST00000496347 E2F8A0AVK6 867 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 K7ESF4 209 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 ADH1CP00326 375 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 YWHAEP62258 255 aaKnown RBP16.61■□□□□ 0.25
HDAC4-213ENST00000496347 MORC3Q14149 939 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 TTI2Q6NXR4 508 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 FILIP1Q7Z7B0 1213 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 CD101Q93033 1021 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 OTUB2Q96DC9 234 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 ZFRQ96KR1 1074 aaKnown RBP16.61■□□□□ 0.25
HDAC4-213ENST00000496347 ARID3AQ99856 593 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 HINFPQ9BQA5 517 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 NACA2Q9H009 215 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 CYLDQ9NQC7 956 aa16.61■□□□□ 0.25
HDAC4-213ENST00000496347 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CHURC1-FNTBB4DL54 471 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 HHLA1C9JL84 531 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 PMM2O15305 246 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CYP26A1O43174 497 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 TLR5O60602 858 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 RNF40O75150 1001 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 EGFP01133 1207 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CYP17A1P05093 508 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
HDAC4-213ENST00000496347 TBXAS1P24557 533 aaPredicted RBP16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CNR2P34972 360 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 EIF2DP41214 584 aaKnown RBP16.6■□□□□ 0.25
HDAC4-213ENST00000496347 UBE2HP62256 183 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CUL2Q13617 745 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 GPRIN1Q7Z2K8 1008 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 LONP2Q86WA8 852 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 TRIML1Q8N9V2 468 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
HDAC4-213ENST00000496347 ACDQ96AP0 544 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 CCSER2Q9H7U1 834 aa16.6■□□□□ 0.25
HDAC4-213ENST00000496347 GADD45BO75293 160 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms