RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 THG1LQ9NWX6 298 aaKnown RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 GMIPQ9P107 970 aa13.04□□□□□ -0.32
TRIM59-207ENST00000496222 NDRG2Q9UN36 371 aaKnown RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
TRIM59-207ENST00000496222 LEFTY2O00292 366 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 P4HA2O15460 535 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 COCHO43405 550 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
TRIM59-207ENST00000496222 KCNH2Q12809 1159 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 IFRD2Q12894 506 aaPredicted RBP13.03□□□□□ -0.32
TRIM59-207ENST00000496222 EML3Q32P44 896 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 ARHGAP17Q68EM7 881 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 KIAA1958Q8N8K9 716 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 MLKLQ8NB16 471 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 KAT5Q92993 513 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 HEXIM2Q96MH2 286 aaKnown RBP13.03□□□□□ -0.32
TRIM59-207ENST00000496222 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 OSER1Q9NX31 292 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 USP3Q9Y6I4 520 aa13.03□□□□□ -0.32
TRIM59-207ENST00000496222 RNF225M0QZC1 329 aaPredicted RBP13.02□□□□□ -0.33
TRIM59-207ENST00000496222 NCAM2O15394 837 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 GNA14O95837 355 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 SP9P0CG40 484 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 TDGF1P13385 188 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 MRE11P49959 708 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 TUBP50607 506 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 PDE6CP51160 858 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 KIF11P52732 1056 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 LRMPQ12912 555 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 MTAPQ13126 283 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 CCINQ13939 588 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 PDGFRLQ15198 375 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 GAB4Q2WGN9 574 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 NAIF1Q69YI7 327 aaPredicted RBP13.02□□□□□ -0.33
TRIM59-207ENST00000496222 C1orf228Q6PIY5 440 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 ALYREFQ86V81 257 aaKnown RBP13.02□□□□□ -0.33
TRIM59-207ENST00000496222 TTC30AQ86WT1 665 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 EHBP1Q8NDI1 1231 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 NELL1Q92832 810 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 UBXN6Q9BZV1 441 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 FBXO44Q9H4M3 255 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 CCSER2Q9H7U1 834 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 LMAN1LQ9HAT1 526 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 NMUR1Q9HB89 426 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 FBRSL1Q9HCM7 1045 aaKnown RBP13.02□□□□□ -0.33
TRIM59-207ENST00000496222 RBM12Q9NTZ6 932 aaKnown RBP13.02□□□□□ -0.33
TRIM59-207ENST00000496222 DUS2Q9NX74 493 aaKnown RBP13.02□□□□□ -0.33
TRIM59-207ENST00000496222 SCML2Q9UQR0 700 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 CPQQ9Y646 472 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 WNT6Q9Y6F9 365 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 ZNF292O60281 2723 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.33
TRIM59-207ENST00000496222 DMXL1Q9Y485 3027 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 TRDMT1O14717 391 aaKnown RBP13.01□□□□□ -0.33
TRIM59-207ENST00000496222 CYP26A1O43174 497 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 GREM1O60565 184 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 ABL1P00519 1130 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 GJA4P35212 333 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 PON2Q15165 354 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 DPCR1Q3MIW9 517 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 PKDCCQ504Y2 493 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 TMEM196Q5HYL7 178 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 RAB41Q5JT25 222 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 HECTD3Q5T447 861 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 SCD5Q86SK9 330 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 ARHGEF19Q8IW93 802 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 TFAP2BQ92481 460 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 WBP2Q969T9 261 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 KREMEN1Q96MU8 473 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 IPO9Q96P70 1041 aaKnown RBP13.01□□□□□ -0.33
TRIM59-207ENST00000496222 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
TRIM59-207ENST00000496222 SPATA6Q9NWH7 488 aaPredicted RBP13.01□□□□□ -0.33
TRIM59-207ENST00000496222 SMPD4Q9NXE4 827 aa13.01□□□□□ -0.33
TRIM59-207ENST00000496222 MYOFQ9NZM1 2061 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 TULP2O00295 520 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 TBX18O95935 607 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 AFPP02771 609 aaKnown RBP13□□□□□ -0.33
TRIM59-207ENST00000496222 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
TRIM59-207ENST00000496222 ZNF132P52740 706 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 GCNT1Q02742 428 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 ZNF528Q3MIS6 628 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 FSTL4Q6MZW2 842 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 CC2D1AQ6P1N0 951 aaPredicted RBP13□□□□□ -0.33
TRIM59-207ENST00000496222 RBM43Q6ZSC3 357 aaKnown RBP13□□□□□ -0.33
TRIM59-207ENST00000496222 BHLHA9Q7RTU4 235 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 CCDC186Q7Z3E2 898 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 ADGRG2Q8IZP9 1017 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 ZNF276Q8N554 614 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 EZH1Q92800 747 aaPredicted RBP13□□□□□ -0.33
TRIM59-207ENST00000496222 ATP2A3Q93084 1043 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 JAKMIP2Q96AA8 810 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 CNOT6LQ96LI5 555 aaKnown RBP13□□□□□ -0.33
TRIM59-207ENST00000496222 NT5C1BQ96P26 610 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 NUP62CLQ9H1M0 184 aa13□□□□□ -0.33
TRIM59-207ENST00000496222 CYLDQ9NQC7 956 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms