RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZNF618Q5T7W0 954 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 HLA-DQA1Q5Y7H0 255 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 C1orf228Q6PIY5 440 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 TMPRSS7Q7RTY8 843 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 SERINC5Q86VE9 423 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 DENND1CQ8IV53 801 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 ADGRF4Q8IZF3 695 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 TMEM151AQ8N4L1 468 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 FLCNQ8NFG4 579 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 DBF4BQ8NFT6 615 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 LINC01599Q8WXQ3 324 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 TBC1D5Q92609 795 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 C1GALT1C1Q96EU7 318 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 TAAR1Q96RJ0 339 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 PDCD2LQ9BRP1 358 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 B3GNT5Q9BYG0 378 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 FAM204AQ9H8W3 233 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 PARD6AQ9NPB6 346 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 NGRNQ9NPE2 291 aaKnown RBP4.83□□□□□ -1.64
VPS52-222ENST00000495981 LIMCH1Q9UPQ0 1083 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 ITPR1Q14643 2758 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 DENND4AQ7Z401 1863 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 ZNF462Q96JM2 2506 aa4.83□□□□□ -1.64
VPS52-222ENST00000495981 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 C2CD4DB7Z1M9 353 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 C5orf67F2Z3F1 127 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 ACOT7O00154 380 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 EFEMP2O95967 443 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 ITGB1P05556 798 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 CTNNB1P35222 781 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 BMPR1AP36894 532 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 NRIP1P48552 1158 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 NT5C2P49902 561 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 AGFG1P52594 562 aaKnown RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 MYBPC3Q14896 1274 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 KIAA0753Q2KHM9 967 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 UAP1L1Q3KQV9 507 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 HSDL1Q3SXM5 330 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 MROH9Q5TGP6 573 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 MBNL2Q5VZF2 373 aaKnown RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 SYCE2Q6PIF2 218 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 CCDC149Q6ZUS6 474 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 SYDE1Q6ZW31 735 aaPredicted RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 LURAP1LQ8IV03 231 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 MAML2Q8IZL2 1156 aaPredicted RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 NLGN4XQ8N0W4 816 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 KRT78Q8N1N4 520 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 PLD6Q8N2A8 252 aaKnown RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 NKAPQ8N5F7 415 aaKnown RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 PPM1NQ8N819 430 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 ANKRD42Q8N9B4 389 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 NSUN6Q8TEA1 469 aaKnown RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 ATP8B4Q8TF62 1192 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 ASB15Q8WXK1 588 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 RUBCNQ92622 972 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 TOP1MTQ969P6 601 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 MAP6Q96JE9 813 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 TTC14Q96N46 770 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 RMDN3Q96TC7 470 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 HERPUD2Q9BSE4 406 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 C16orf70Q9BSU1 422 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 KATNAL1Q9BW62 490 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 KCTD10Q9H3F6 313 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 JMJD4Q9H9V9 463 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 TNFRSF10DQ9UBN6 386 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 HDAC6Q9UBN7 1215 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 COA3Q9Y2R0 106 aaPredicted RBP4.82□□□□□ -1.64
VPS52-222ENST00000495981 TAF6LQ9Y6J9 622 aa4.82□□□□□ -1.64
VPS52-222ENST00000495981 IGSF10Q6WRI0 2623 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 EMSYQ7Z589 1322 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 NOTOA8MTQ0 251 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 HTRA2O43464 458 aaPredicted RBP4.81□□□□□ -1.64
VPS52-222ENST00000495981 CYTH3O43739 400 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 LGALS2P05162 132 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 MMEP08473 750 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 CELA3BP08861 270 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 WEE2P0C1S8 567 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 SP9P0CG40 484 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 GSPT1P15170 499 aaKnown RBP4.81□□□□□ -1.64
VPS52-222ENST00000495981 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
VPS52-222ENST00000495981 CD53P19397 219 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 AOC1P19801 751 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 FAM193AP78312 1265 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 ADAM17P78536 824 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 SP2Q02086 613 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 CYP27A1Q02318 531 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 KIR3DS1Q14943 382 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 PGM5Q15124 567 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 DGKDQ16760 1214 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 PGS1Q32NB8 556 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 C3orf36Q3SXR2 165 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 NPNTQ6UXI9 565 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 UNQ6494/PRO21346Q6UXR6 183 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 MFSD6Q6ZSS7 791 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 SEPT14Q6ZU15 432 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 ESPNLQ6ZVH7 1005 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 CYB5R4Q7L1T6 521 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
VPS52-222ENST00000495981 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms