RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 TASP1Q9H6P5 420 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 CNGB3Q9NQW8 809 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 EPS15L1Q9UBC2 864 aa18.01■□□□□ 0.47
HDAC6-235ENST00000495515 NOCTQ9UK39 431 aaKnown RBP18.01■□□□□ 0.47
HDAC6-235ENST00000495515 BZW2Q9Y6E2 419 aaKnown RBP18.01■□□□□ 0.47
HDAC6-235ENST00000495515 PTPRDP23468 1912 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 ZNF840PA6NDX5 716 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 SART1O43290 800 aaKnown RBP18■□□□□ 0.47
HDAC6-235ENST00000495515 AP5Z1O43299 807 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 FBXO21O94952 628 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 ZBED1O96006 694 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 ABL1P00519 1130 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 SP100P23497 879 aaPredicted RBP18■□□□□ 0.47
HDAC6-235ENST00000495515 CASP14P31944 242 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 CYP4F8P98187 520 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 ZP2Q05996 745 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 ADIGQ0VDE8 80 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 IRF2BP2Q7Z5L9 587 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 TMEM150AQ86TG1 271 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 MON1AQ86VX9 555 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 IPO4Q8TEX9 1081 aaKnown RBP18■□□□□ 0.47
HDAC6-235ENST00000495515 SLC4A5Q9BY07 1137 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 MIS12Q9H081 205 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 SYNCQ9H7C4 482 aa18■□□□□ 0.47
HDAC6-235ENST00000495515 CHORDC1Q9UHD1 332 aaPredicted RBP18■□□□□ 0.47
HDAC6-235ENST00000495515 C2CD4DB7Z1M9 353 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 LOC730098B7Z3J9 87 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 MMEP08473 750 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 CFHP08603 1231 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 USP17L7P0C7H9 530 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 LCP1P13796 627 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 CDH5P33151 784 aaPredicted RBP17.99■□□□□ 0.47
HDAC6-235ENST00000495515 AVPR1AP37288 418 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 PRKCIP41743 596 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 RPL34P49207 117 aaKnown RBP17.99■□□□□ 0.47
HDAC6-235ENST00000495515 KLHL30Q0D2K2 578 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 PDCLQ13371 301 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 SNX30Q5VWJ9 437 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 PM20D1Q6GTS8 502 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 MTSS1LQ765P7 747 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 TMC6Q7Z403 805 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 TADA2BQ86TJ2 420 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 GPIHBP1Q8IV16 184 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 SCML4Q8N228 414 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 C1orf131Q8NDD1 294 aaKnown RBP17.99■□□□□ 0.47
HDAC6-235ENST00000495515 SLC20A1Q8WUM9 679 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 IRGQQ8WZA9 623 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 GOLGA1Q92805 767 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 PPP1R13BQ96KQ4 1090 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 AGPAT1Q99943 283 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 ULBP1Q9BZM6 244 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 TRPC7Q9HCX4 862 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 SEPT11Q9NVA2 429 aaKnown RBP17.99■□□□□ 0.47
HDAC6-235ENST00000495515 ZNHIT6Q9NWK9 470 aaKnown RBP17.99■□□□□ 0.47
HDAC6-235ENST00000495515 GMIPQ9P107 970 aa17.99■□□□□ 0.47
HDAC6-235ENST00000495515 TTC28Q96AY4 2481 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 TRAV19A0A0A6YYK7 116 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 TADA3O75528 432 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 RALAP11233 206 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 TNFAIP3P21580 790 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 WEE1P30291 646 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 TUBP50607 506 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 FMO1Q01740 532 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 HECTD3Q5T447 861 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 TXNDC8Q6A555 127 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 PPP1R2P3Q6NXS1 205 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 TMEM110Q86TL2 294 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 VPS36Q86VN1 386 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 CNGA4Q8IV77 575 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 MAB21L3Q8N8X9 362 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 OR8K1Q8NGG5 319 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 ZSCAN18Q8TBC5 510 aaPredicted RBP17.98■□□□□ 0.47
HDAC6-235ENST00000495515 SMARCD2Q92925 531 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 NXPE3Q969Y0 559 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 E2F7Q96AV8 911 aa17.98■□□□□ 0.47
HDAC6-235ENST00000495515 CDK5RAP1Q96SZ6 601 aaKnown RBP17.98■□□□□ 0.47
HDAC6-235ENST00000495515 C2orf16Q68DN1 1984 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 C19orf67A6NJJ6 358 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 CHRNB2P17787 502 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 HDCP19113 662 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 TDRD12Q587J7 1177 aaKnown RBP17.97■□□□□ 0.47
HDAC6-235ENST00000495515 STXBP5Q5T5C0 1151 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 ERICH1Q86X53 443 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 CMTM8Q8IZV2 173 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 WDTC1Q8N5D0 677 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 ADAMTS19Q8TE59 1207 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 TRIM62Q9BVG3 475 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 SLC46A2Q9BY10 475 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 NACA2Q9H009 215 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 HAUS4Q9H6D7 363 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 ZFP14Q9HCL3 533 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 CLIC5Q9NZA1 410 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 IGSF9Q9P2J2 1179 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 NAGPAQ9UK23 515 aa17.97■□□□□ 0.47
HDAC6-235ENST00000495515 VCANP13611 3396 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 REV3LO60673 3130 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 A0A1W2PQH9 124 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 GOLGA6L3A6NEY3 463 aa17.96■□□□□ 0.47
HDAC6-235ENST00000495515 AKR1B15C9JRZ8 316 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms