RNA–Protein interactions for RNA: ENST00000495491.5

HCLS1-211, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 1,219 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-211	ENST00000495491	PHACTR2	O75167	634 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	RHOBTB3	O94955	611 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	KIF20A	O95235	890 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	ADH1C	P00326	375 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	ADRB1	P08588	477 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	AFM	P43652	599 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	DGKE	P52429	567 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	INCA1	Q0VD86	236 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	PKP1	Q13835	747 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	KMT5B	Q4FZB7	885 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	C1orf220	Q5T0J3	134 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	HECTD3	Q5T447	861 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	KLHDC10	Q6PID8	442 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	RHBDF2	Q6PJF5	856 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	SV2A	Q7L0J3	742 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	FILIP1	Q7Z7B0	1213 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	FAM35A	Q86V20	835 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	ZNF276	Q8N554	614 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	IPO9	Q96P70	1041 aa	Known RBP	13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	SMYD3	Q9H7B4	428 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	VPS45	Q9NRW7	570 aa		13.62	□□□□□ -0.23
HCLS1-211	ENST00000495491	RHOBTB1	O94844	696 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	NR3C1	P04150	777 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	HSP90AA1	P07900	732 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	CCDC192	P0DO97	292 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	PFKFB1	P16118	471 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	GRIA2	P42262	883 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	TNFRSF4	P43489	277 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	CASP4	P49662	377 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	SLC5A3	P53794	718 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	BIRC3	Q13489	604 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	CRY1	Q16526	586 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	PREPL	Q4J6C6	727 aa	Predicted RBP	13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	ETFBKMT	Q8IXQ9	262 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	PHTF2	Q8N3S3	785 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	OLIG1	Q8TAK6	271 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	PNKP	Q96T60	521 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	SDCBP2	Q9H190	292 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	FBXO44	Q9H4M3	255 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	CYP3A43	Q9HB55	503 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	CYLD	Q9NQC7	956 aa		13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491	MAP1B	P46821	2468 aa	Known RBP	13.61	□□□□□ -0.23
HCLS1-211	ENST00000495491		A0A1W2PQ27	194 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491		A0A1W2PQ64	194 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491		A0A1W2PQD8	194 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	BCLAF3	A2AJT9	711 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	DCDC2B	A2VCK2	349 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	TULP1	O00294	542 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	CLDN5	O00501	218 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	COCH	O43405	550 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	GTF2H1	P32780	548 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	MPL	P40238	635 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	KIR2DL1	P43626	348 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	ASPA	P45381	313 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	PXN	P49023	591 aa	Predicted RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	CDH8	P55286	799 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	ELF2	Q15723	593 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	USP39	Q53GS9	565 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	SPDYC	Q5MJ68	293 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	INTS8	Q75QN2	995 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	GRAMD1C	Q8IYS0	662 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	GUF1	Q8N442	669 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	ZMIZ2	Q8NF64	920 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	TSTD1	Q8NFU3	115 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	FBXO32	Q969P5	355 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	HHIP	Q96QV1	700 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	KCNK16	Q96T55	309 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	HNRNPAB	Q99729	332 aa	Known RBP	13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	ARRDC1-AS1	Q9H2J1	176 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	CFAP97	Q9P2B7	532 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	SCML2	Q9UQR0	700 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	FRMD4B	Q9Y2L6	1034 aa		13.6	□□□□□ -0.23
HCLS1-211	ENST00000495491	CALU	O43852	315 aa	Predicted RBP	13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	GDF9	O60383	454 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	GREM1	O60565	184 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	KAT7	O95251	611 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	MBL2	P11226	248 aa	Predicted RBP	13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	DLG4	P78352	724 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	KRT85	P78386	507 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	PMS2CL	Q68D20	193 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	HTR3D	Q70Z44	454 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	TTC39C	Q8N584	583 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	IL17RC	Q8NAC3	791 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	SCAMP5	Q8TAC9	235 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	SMO	Q99835	787 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	MARK1	Q9P0L2	795 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	STARD13	Q9Y3M8	1113 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	ATG2B	Q96BY7	2078 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	USP24	Q9UPU5	2620 aa		13.59	□□□□□ -0.23
HCLS1-211	ENST00000495491	HELZ	P42694	1942 aa	Known RBP	13.58	□□□□□ -0.23
HCLS1-211	ENST00000495491	LAMA1	P25391	3075 aa		13.58	□□□□□ -0.23
HCLS1-211	ENST00000495491	GON4L	Q3T8J9	2241 aa		13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491		A0A1B0GVL5	298 aa		13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491	AP1G2	O75843	785 aa		13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491	APOD	P05090	189 aa		13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491	ADH5	P11766	374 aa		13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491	TRIM21	P19474	475 aa	Known RBP	13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491	SYK	P43405	635 aa		13.58	□□□□□ -0.24
HCLS1-211	ENST00000495491	NDST1	P52848	882 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms