RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 AVPR1AP37288 418 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 KLK7P49862 253 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 COPB1P53618 953 aaKnown RBP18.07■□□□□ 0.48
SNX17-209ENST00000494893 MFAP3P55082 362 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 FANCCQ00597 558 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 ZNF268Q14587 947 aaPredicted RBP18.07■□□□□ 0.48
SNX17-209ENST00000494893 RAB41Q5JT25 222 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 CWF19L1Q69YN2 538 aaKnown RBP18.07■□□□□ 0.48
SNX17-209ENST00000494893 ENOSF1Q7L5Y1 443 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 CELF5Q8N6W0 485 aaKnown RBP18.07■□□□□ 0.48
SNX17-209ENST00000494893 OVCA2Q8WZ82 227 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 PBXIP1Q96AQ6 731 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 ZFYVE19Q96K21 471 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 UBXN6Q9BZV1 441 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 NMUR1Q9HB89 426 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 OSER1Q9NX31 292 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 DNAJC12Q9UKB3 198 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNX17-209ENST00000494893 SCML2Q9UQR0 700 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 KIF26AQ9ULI4 1882 aaPredicted RBP18.06■□□□□ 0.48
SNX17-209ENST00000494893 TRAV19A0A0A6YYK7 116 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 LRRC10BA6NIK2 292 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 PES1O00541 588 aaKnown RBP18.06■□□□□ 0.48
SNX17-209ENST00000494893 CKMP06732 381 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 USP17L7P0C7H9 530 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 PNMA6AP0CW24 399 aaPredicted RBP18.06■□□□□ 0.48
SNX17-209ENST00000494893 KRT5P13647 590 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 HDCP19113 662 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 PPP3CCP48454 512 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 BCAT1P54687 386 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 PLCB2Q00722 1185 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 USP4Q13107 963 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 ZNF77Q15935 545 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 CNGA2Q16280 664 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 KLHDC7AQ5VTJ3 777 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 BHLHA9Q7RTU4 235 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 SCD5Q86SK9 330 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 PDZD8Q8NEN9 1154 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 ANKRD20A12PQ8NF67 263 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 BPIFB1Q8TDL5 484 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 LSM14BQ9BX40 385 aaKnown RBP18.06■□□□□ 0.48
SNX17-209ENST00000494893 NAA15Q9BXJ9 866 aaKnown RBP18.06■□□□□ 0.48
SNX17-209ENST00000494893 CCSER2Q9H7U1 834 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 BRD9Q9H8M2 597 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 FBXL21Q9UKT6 434 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 FHOD1Q9Y613 1164 aa18.06■□□□□ 0.48
SNX17-209ENST00000494893 FOXN3O00409 490 aaPredicted RBP18.05■□□□□ 0.48
SNX17-209ENST00000494893 DPYSL4O14531 572 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 XPO1O14980 1071 aaKnown RBP18.05■□□□□ 0.48
SNX17-209ENST00000494893 CHADO15335 359 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 COCHO43405 550 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 ABL1P00519 1130 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 VCPP55072 806 aaKnown RBP18.05■□□□□ 0.48
SNX17-209ENST00000494893 SLC7A9P82251 487 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 BST2Q10589 180 aaKnown RBP18.05■□□□□ 0.48
SNX17-209ENST00000494893 SLC44A4Q53GD3 710 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 FBXL6Q8N531 539 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 SLC35F5Q8WV83 523 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 ZFRQ96KR1 1074 aaKnown RBP18.05■□□□□ 0.48
SNX17-209ENST00000494893 GANQ9H2C0 597 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 ARHGAP26Q9UNA1 814 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 SIK3Q9Y2K2 1263 aa18.05■□□□□ 0.48
SNX17-209ENST00000494893 A0A1W2PQH9 124 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 LGALS16A8MUM7 142 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 ZNF263O14978 683 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 EPHB6O15197 1021 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 SERPINC1P01008 464 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 TCF3P15923 654 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 PFKLP17858 780 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 PLA2G4AP47712 749 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 CCDC186Q7Z3E2 898 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 SH3RF2Q8TEC5 729 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 NDRG1Q92597 394 aaKnown RBP18.04■□□□□ 0.48
SNX17-209ENST00000494893 ANP32BQ92688 251 aaKnown RBP18.04■□□□□ 0.48
SNX17-209ENST00000494893 DNASE1L2Q92874 299 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 SECISBP2LQ93073 1101 aaKnown RBP18.04■□□□□ 0.48
SNX17-209ENST00000494893 FAM81BQ96LP2 452 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 FAM83CQ9BQN1 747 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 DDX23Q9BUQ8 820 aaKnown RBP18.04■□□□□ 0.48
SNX17-209ENST00000494893 TRIM5Q9C035 493 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 KIF9Q9HAQ2 790 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 TRPV5Q9NQA5 729 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 HEBP1Q9NRV9 189 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 HESX1Q9UBX0 185 aa18.04■□□□□ 0.48
SNX17-209ENST00000494893 M0QYV0 167 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 PI15O43692 258 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 ADCY5O95622 1261 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 TBX18O95935 607 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 SETSIPP0DME0 302 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 UCHL3P15374 230 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 CLCN1P35523 988 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 ZNF75DP51815 510 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 STARD6P59095 220 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 PFKPQ01813 784 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 TNK2Q07912 1038 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 MLF2Q15773 248 aaPredicted RBP18.03■□□□□ 0.48
SNX17-209ENST00000494893 ARHGAP29Q52LW3 1261 aa18.03■□□□□ 0.48
SNX17-209ENST00000494893 PMF1Q6P1K2 205 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms