RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 DDX23Q9BUQ8 820 aaKnown RBP12.04□□□□□ -0.48
HDLBP-245ENST00000494862 HEMGNQ9BXL5 484 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 PLEKHA4Q9H4M7 779 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 ZWILCHQ9H900 591 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 KRT82Q9NSB4 513 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 KLHL11Q9NVR0 708 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 FAM53CQ9NYF3 392 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 FEZ2Q9UHY8 353 aaPredicted RBP12.04□□□□□ -0.48
HDLBP-245ENST00000494862 LRFN2Q9ULH4 789 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 USP18Q9UMW8 372 aa12.04□□□□□ -0.48
HDLBP-245ENST00000494862 hCG_1818297A0A087WSY0 165 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 ESYT3A0FGR9 886 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 LRRD1A4D1F6 860 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 C3orf70A6NLC5 250 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TRAPPC3O43617 180 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 HSF2BPO75031 334 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 DAB1O75553 588 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 SASH3O75995 380 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 BEST1O76090 585 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 ITGB1P05556 798 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 KDELR1P24390 212 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CDKN2BP42772 138 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TNNT3P45378 269 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CCL23P55773 120 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 MAP3K7CLP57077 242 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 MRPS5P82675 430 aaKnown RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 ADIGQ0VDE8 80 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CASP8Q14790 479 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 LLGL1Q15334 1064 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 C15orf59Q2T9L4 293 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 BOLA3Q53S33 107 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TFDP3Q5H9I0 405 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 SYDE1Q6ZW31 735 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 NPAS4Q8IUM7 802 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CCDC105Q8IYK2 499 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 SIX6OS1Q8N1H7 587 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 GRK7Q8WTQ7 553 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CLEC4CQ8WTT0 213 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TEKT4Q8WW24 435 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 C1orf54Q8WWF1 131 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CENPIQ92674 756 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 ABHD8Q96I13 439 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 SCLYQ96I15 445 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TBCBQ99426 244 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TRIM51Q9BSJ1 452 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 C11orf84Q9BUA3 381 aaPredicted RBP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 COLEC11Q9BWP8 271 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 OCEL1Q9H607 264 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 NRDE2Q9H7Z3 1164 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 VIPAS39Q9H9C1 493 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 CSNK1G1Q9HCP0 422 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.03□□□□□ -0.48
HDLBP-245ENST00000494862 OGFRQ9NZT2 677 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 NFU1Q9UMS0 254 aa12.03□□□□□ -0.48
HDLBP-245ENST00000494862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 F8W810 466 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 SYN3O14994 580 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 DAPK3O43293 454 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 PRPSAP2O60256 369 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 TADA2AO75478 443 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 ENDOD1O94919 500 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 OAZ2O95190 189 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 ECEL1O95672 775 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 HSPA8P11142 646 aaKnown RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 KRT10P13645 584 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 GBP1P32455 592 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 CYP2C18P33260 490 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 RFC2P35250 354 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 YWHAHQ04917 246 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 TRADDQ15628 312 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 CDO1Q16878 200 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 SH3PXD2AQ5TCZ1 1133 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 KAZNQ674X7 775 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 SND1Q7KZF4 910 aaKnown RBP eCLIP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 CRIPAKQ8N1N5 446 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 KCTD6Q8NC69 237 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 ZMIZ2Q8NF64 920 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 OR10T2Q8NGX3 314 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 ATL2Q8NHH9 583 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 FAM172AQ8WUF8 416 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 ACSF2Q96CM8 615 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 CFAP57Q96MR6 1250 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 PEBP4Q96S96 227 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 TMEM175Q9BSA9 504 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 MRPL9Q9BYD2 267 aaKnown RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 FRMD8P1Q9BZ68 369 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 CHST7Q9NS84 486 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 DNAJB4Q9UDY4 337 aa12.02□□□□□ -0.49
HDLBP-245ENST00000494862 R3HDM2Q9Y2K5 976 aaKnown RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 PRG3Q9Y2Y8 225 aaPredicted RBP12.02□□□□□ -0.49
HDLBP-245ENST00000494862 TNRC18O15417 2968 aaPredicted RBP12.01□□□□□ -0.49
HDLBP-245ENST00000494862 HHLA1C9JL84 531 aa12.01□□□□□ -0.49
HDLBP-245ENST00000494862 NRP1O14786 923 aa12.01□□□□□ -0.49
HDLBP-245ENST00000494862 RRP9O43818 475 aaKnown RBP12.01□□□□□ -0.49
HDLBP-245ENST00000494862 ALDH2P05091 517 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms