RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 SKOR1P84550 965 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ATP11AP98196 1134 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 OTUD4Q01804 1114 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CAV1Q03135 178 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 LMNB2Q03252 620 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 MMRN1Q13201 1228 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 SLMAPQ14BN4 828 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 OTUD1Q5VV17 481 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 HIBCHQ6NVY1 386 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ZNF365Q70YC5 407 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 PIGZQ86VD9 579 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 SLC43A3Q8NBI5 491 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 KCTD6Q8NC69 237 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 TEKT4Q8WW24 435 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 ADAM2Q99965 735 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 RTP3Q9BQQ7 232 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 DUSP16Q9BY84 665 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 FRMD8P1Q9BZ68 369 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 SQORQ9Y6N5 450 aa11.12□□□□□ -0.63
PRPF4B-209ENST00000494674 CASTOR2A6NHX0 329 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 APOC4-APOC2K7ER74 178 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 INPPL1O15357 1258 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 PRPSAP2O60256 369 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 CAND2O75155 1236 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 APOC2P02655 101 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 MYZAPP0CAP1 466 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 LCP1P13796 627 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 NPR3P17342 541 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 RPL9P32969 192 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 ACADSBP45954 432 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 EIF3BP55884 814 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 SNX16P57768 344 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 PLCB3Q01970 1234 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 CA9Q16790 459 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 P3H1Q32P28 736 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 TIGD5Q53EQ6 642 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 ODF2Q5BJF6 829 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 MDH1BQ5I0G3 518 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 IZUMO3Q5VZ72 239 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 CLEC20AQ6ZU45 233 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 TMEM86AQ8N2M4 240 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 PWWP2AQ96N64 755 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 TBCBQ99426 244 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 TMEM121Q9BTD3 319 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 DDX23Q9BUQ8 820 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 SNRNP25Q9BV90 132 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 TRPV6Q9H1D0 765 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 CDC42EP4Q9H3Q1 356 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 RSAD1Q9HA92 442 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 PCDH9Q9HC56 1237 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 NGRNQ9NPE2 291 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 TMEM30AQ9NV96 361 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 DDX43Q9NXZ2 648 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 ANAPC5Q9UJX4 755 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.11□□□□□ -0.63
PRPF4B-209ENST00000494674 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 DNALI1O14645 258 aaPredicted RBP11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 MDM4O15151 490 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 INHAP05111 366 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 CKBP12277 381 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 HOXD10P28358 340 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 GDF10P55107 478 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 CDH6P55285 790 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 ADIGQ0VDE8 80 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 ZC3H12AQ5D1E8 599 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 AGBL2Q5U5Z8 902 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 DENND2CQ68D51 928 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 KDM7AQ6ZMT4 941 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 TRMT10CQ7L0Y3 403 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 BNIPLQ7Z465 357 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 RTN4RL1Q86UN2 441 aaPredicted RBP11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 ECHDC2Q86YB7 292 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 PQLC3Q8N755 202 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 LINC01599Q8WXQ3 324 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 KCTD13Q8WZ19 329 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 FAF2Q96CS3 445 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 TSEN34Q9BSV6 310 aaKnown RBP11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 TMEM109Q9BVC6 243 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 DNAI2Q9GZS0 605 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 C10orf88Q9H8K7 445 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 PCDH18Q9HCL0 1135 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 TIMM13Q9Y5L4 95 aaPredicted RBP11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 VWA8A3KMH1 1905 aa11.1□□□□□ -0.63
PRPF4B-209ENST00000494674 A0A1W2PQ45 241 aaPredicted RBP11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 A0A1W2PQY0 241 aa11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 MYBPHLA2RUH7 354 aa11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 DCDC2CA8MYV0 355 aa11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 B4GALT3O60512 393 aa11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 POMCP01189 267 aa11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 LHX1P48742 406 aa11.09□□□□□ -0.63
PRPF4B-209ENST00000494674 ATXN1P54253 815 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms