RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 KCNJ2P63252 427 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 CCNA1P78396 465 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 RNASELQ05823 741 aaKnown RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 BNIP1Q12981 228 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 TFDP2Q14188 446 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 NOMO1Q15155 1222 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 SEPT7Q16181 437 aaKnown RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 MARCH8Q5T0T0 291 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 C9orf131Q5VYM1 1079 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 SMYD5Q6GMV2 418 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 LVRNQ6Q4G3 990 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 FAM228AQ86W67 206 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 C7orf31Q8N865 590 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 FAF2Q96CS3 445 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 RNF157Q96PX1 679 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 PLCD4Q9BRC7 762 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 FAM49AQ9H0Q0 323 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 C12orf65Q9H3J6 166 aaKnown RBP11.7□□□□□ -0.54
CHMP3-209ENST00000494623 ZNF408Q9H9D4 720 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 RXFP1Q9HBX9 757 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 SETD4Q9NVD3 440 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 BAIAP2L1Q9UHR4 511 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 HES2Q9Y543 173 aa11.7□□□□□ -0.54
CHMP3-209ENST00000494623 LOC102724159A0A0B4J2E5 919 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 E7ESA3 106 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 PDHXO00330 501 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 TYROBPO43914 113 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 MGRN1O60291 552 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 SNAI1O95863 264 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 IBSPP21815 317 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 GCLCP48506 637 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 YARSP54577 528 aaKnown RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 PWP2Q15269 919 aaKnown RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 GLRA4Q5JXX5 417 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 ADGRD1Q6QNK2 874 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 DPP9Q86TI2 863 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 TTC30AQ86WT1 665 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 MAP7D3Q8IWC1 876 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 KIF2BQ8N4N8 673 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 FAM172AQ8WUF8 416 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 ZMAT2Q96NC0 199 aaKnown RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 B3GNT5Q9BYG0 378 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 ACSS3Q9H6R3 686 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 PPCSQ9HAB8 311 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 KCNN4O15554 427 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 ATP2A2P16615 1042 aaKnown RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 IL4RP24394 825 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 EPHX2P34913 555 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 GRM5P41594 1212 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 PDK4Q16654 411 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 KLHL38Q2WGJ6 581 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 PPP6R3Q5H9R7 873 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 FAM47CQ5HY64 1035 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 CEP57Q86XR8 500 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 PLD5Q8N7P1 536 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 GBP7Q8N8V2 638 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 C18orf25Q96B23 403 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-209ENST00000494623 KLHL29Q96CT2 875 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 RAB6BQ9NRW1 208 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 TRIM33Q9UPN9 1127 aa11.69□□□□□ -0.54
CHMP3-209ENST00000494623 CFAP73A6NFT4 308 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 IGF2BP3O00425 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 HCRTO43612 131 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 SMPD1P17405 629 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 SDC4P31431 198 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 SLC18A1P54219 525 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 BCAR1P56945 870 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 YWHAGP61981 247 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 SLC6A3Q01959 620 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 CA9Q16790 459 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 BOLA3Q53S33 107 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 FAXCQ5TGI0 409 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 RNF43Q68DV7 783 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 APOL6Q9BWW8 343 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 EIF2AQ9BY44 585 aaKnown RBP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 CDHR5Q9HBB8 845 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 TUBGCP4Q9UGJ1 667 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 STARD13Q9Y3M8 1113 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 NME7Q9Y5B8 376 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 COL1A2P08123 1366 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 PDGFRBP09619 1106 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 NQO1P15559 274 aaKnown RBP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 RBL1P28749 1068 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 RASA2Q15283 850 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 OLFML1Q6UWY5 402 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 CATSPER4Q7RTX7 472 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 CCDC33Q8N5R6 958 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 TCP10LQ8TDR4 215 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 DCAKDQ8WVC6 231 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 ZNF75CPQ92670 426 aaPredicted RBP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 KHSRPQ92945 711 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 USP29Q9HBJ7 922 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 ALG13Q9NP73 1137 aaKnown RBP11.68□□□□□ -0.54
CHMP3-209ENST00000494623 HESX1Q9UBX0 185 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 STK38LQ9Y2H1 464 aa11.68□□□□□ -0.54
CHMP3-209ENST00000494623 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms