RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 KIF20BQ96Q89 1820 aa19.81■□□□□ 0.76
COL27A1-207ENST00000494090 DGKIO75912 1065 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 DENND5BQ6ZUT9 1274 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 WDR49Q8IV35 697 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 PAFAH2Q99487 392 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 POP1Q99575 1024 aaKnown RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 DUSP9Q99956 384 aaKnown RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 BCAT1P54687 386 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 PNMA5Q96PV4 448 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 AGO4Q9HCK5 861 aaKnown RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 KCND1Q9NSA2 647 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 ALDH1A2O94788 518 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 MTA1Q13330 715 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 KCNT1Q5JUK3 1230 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 PRAMEF18Q5VWM3 479 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 B4GALNT2Q8NHY0 566 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 PRMT6Q96LA8 375 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 APOL5Q9BWW9 433 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 IL17RBQ9NRM6 502 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 DPP7Q9UHL4 492 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 HOXC6P09630 235 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 CNTFP26441 200 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 SERPINB8P50452 374 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 ATXN3P54252 364 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 NCKAP1LP55160 1127 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 ILF2Q12905 390 aaKnown RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 ELAVL2Q12926 359 aaKnown RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 APLFQ8IW19 511 aaPredicted RBP19.8■□□□□ 0.76
COL27A1-207ENST00000494090 BRD8Q9H0E9 1235 aa19.8■□□□□ 0.76
COL27A1-207ENST00000494090 UBTFL6P0CB48 400 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-207ENST00000494090 CDR2LQ86X02 465 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-207ENST00000494090 WNK4Q96J92 1243 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 WWOXQ9NZC7 414 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 DLGAP2Q9P1A6 1054 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 PDP2Q9P2J9 529 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 SPACA6W5XKT8 324 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 B3GAT3O94766 335 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 GSNP06396 782 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 IL1R1P14778 569 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 PCYT1AP49585 367 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 SEPT8Q92599 483 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 UBE2OQ9C0C9 1292 aaKnown RBP19.79■□□□□ 0.76
COL27A1-207ENST00000494090 TM9SF1O15321 606 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 TIMM44O43615 452 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 LHX1P48742 406 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 KPNA1P52294 538 aaPredicted RBP19.79■□□□□ 0.76
COL27A1-207ENST00000494090 DSG1Q02413 1049 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 RCN1Q15293 331 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 SLC26A11Q86WA9 606 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 TFRCP02786 760 aaKnown RBP19.79■□□□□ 0.76
COL27A1-207ENST00000494090 THRAP10827 490 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 APBB2Q92870 758 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 CNPY3Q9BT09 278 aa19.79■□□□□ 0.76
COL27A1-207ENST00000494090 MAGEA13PA6NCF6 341 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 NUDT2P50583 147 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 NCALDP61601 193 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 PSMC6P62333 389 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 C1QBPQ07021 282 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 WLSQ5T9L3 541 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 TXNRD3Q86VQ6 643 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 TRIM69Q86WT6 500 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 HORMAD1Q86X24 394 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 FBXO32Q969P5 355 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 C17orf80Q9BSJ5 609 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 EIF3LQ9Y262 564 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 hCG_2014768A0A024R1R8 64 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 VPS26AO75436 327 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 PGK2P07205 417 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 ACO1P21399 889 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 MEA1Q16626 185 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 SV2AQ7L0J3 742 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 TRIM48Q8IWZ4 208 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 MAP2P11137 1827 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 A0A087X0B3 334 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 MYO1GB0I1T2 1018 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 PIK3CDO00329 1044 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 ASS1P00966 412 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 CCT7Q99832 543 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 TMEM121Q9BTD3 319 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 DRG1Q9Y295 367 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 CALB2P22676 271 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 MAPK1P28482 360 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 UNC45BQ8IWX7 931 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 ABRAQ8N0Z2 381 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 ZFP42Q96MM3 310 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 USP18Q9UMW8 372 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 ZBTB39O15060 712 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 KPNB1Q14974 876 aaKnown RBP19.78■□□□□ 0.76
COL27A1-207ENST00000494090 CACHD1Q5VU97 1274 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 FAM172AQ8WUF8 416 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 HES6Q96HZ4 224 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 UBXN6Q9BZV1 441 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 LRRC40Q9H9A6 602 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 PXMP2Q9NR77 195 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 SCN3BQ9NY72 215 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 TRPM5Q9NZQ8 1165 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 SLC25A13Q9UJS0 675 aa19.78■□□□□ 0.76
COL27A1-207ENST00000494090 APPL1Q9UKG1 709 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms