RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 DACH1Q9UI36 760 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 SCML2Q9UQR0 700 aa23.91■■□□□ 1.42
SNIP1-203ENST00000493916 GOLGA6L22H0YM25 854 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 LEFTY2O00292 366 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 HECTD3Q5T447 861 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 EHBP1Q8NDI1 1231 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 TTC8Q8TAM2 541 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 GPT2Q8TD30 523 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 DUS2Q9NX74 493 aaKnown RBP23.9■■□□□ 1.42
SNIP1-203ENST00000493916 CHORDC1Q9UHD1 332 aaPredicted RBP23.9■■□□□ 1.42
SNIP1-203ENST00000493916 CPQQ9Y646 472 aa23.9■■□□□ 1.42
SNIP1-203ENST00000493916 COCHO43405 550 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 ARSAP15289 507 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 ACO1P21399 889 aaKnown RBP23.89■■□□□ 1.41
SNIP1-203ENST00000493916 ERCC5P28715 1186 aaPredicted RBP23.89■■□□□ 1.41
SNIP1-203ENST00000493916 GCNT1Q02742 428 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 TXNDC11Q6PKC3 985 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 DDX42Q86XP3 938 aaKnown RBP eCLIP23.89■■□□□ 1.41
SNIP1-203ENST00000493916 IRF2BP1Q8IU81 584 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 PPM1KQ8N3J5 372 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 ATP2A3Q93084 1043 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 JAKMIP2Q96AA8 810 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 IER2Q9BTL4 223 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 UBXN6Q9BZV1 441 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 TLR8Q9NR97 1041 aaKnown RBP23.89■■□□□ 1.41
SNIP1-203ENST00000493916 KIAA1257Q9ULG3 409 aa23.89■■□□□ 1.41
SNIP1-203ENST00000493916 CACNA1HO95180 2353 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 OTOL1A6NHN0 477 aaPredicted RBP23.88■■□□□ 1.41
SNIP1-203ENST00000493916 CHRNB1P11230 501 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 IFNAR2P48551 515 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 KIF11P52732 1056 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 EML3Q32P44 896 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 SGO2Q562F6 1265 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 CT47A1Q5JQC4 288 aaPredicted RBP23.88■■□□□ 1.41
SNIP1-203ENST00000493916 CPA6Q8N4T0 437 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 ANKRD52Q8NB46 1076 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 INTS2Q9H0H0 1204 aaKnown RBP23.88■■□□□ 1.41
SNIP1-203ENST00000493916 CHRDQ9H2X0 955 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 THAP9Q9H5L6 903 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 CCSER2Q9H7U1 834 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 SPATA6Q9NWH7 488 aaPredicted RBP23.88■■□□□ 1.41
SNIP1-203ENST00000493916 WNT6Q9Y6F9 365 aa23.88■■□□□ 1.41
SNIP1-203ENST00000493916 MYO16Q9Y6X6 1858 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 CYP26A1O43174 497 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 PAEPP09466 180 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 MBL2P11226 248 aaPredicted RBP23.87■■□□□ 1.41
SNIP1-203ENST00000493916 VDRP11473 427 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 SLC8A3P57103 927 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 LRRC32Q14392 662 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 RBM43Q6ZSC3 357 aaKnown RBP23.87■■□□□ 1.41
SNIP1-203ENST00000493916 CCDC186Q7Z3E2 898 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 ARHGEF19Q8IW93 802 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 TTC16Q8NEE8 873 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 KAT5Q92993 513 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 CHFRQ96EP1 664 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 ZFRQ96KR1 1074 aaKnown RBP23.87■■□□□ 1.41
SNIP1-203ENST00000493916 ECT2Q9H8V3 914 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 FAM86C1Q9NVL1 165 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 SMPD4Q9NXE4 827 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 USP3Q9Y6I4 520 aa23.87■■□□□ 1.41
SNIP1-203ENST00000493916 MYH10P35580 1976 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 PGFP49763 221 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 BCAT1P54687 386 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 AMPD2Q01433 879 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 TPD52L1Q16890 204 aaPredicted RBP23.86■■□□□ 1.41
SNIP1-203ENST00000493916 GOLGA7BQ2TAP0 167 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 TMEM270Q6UE05 265 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 TTC30AQ86WT1 665 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 MAML2Q8IZL2 1156 aaPredicted RBP23.86■■□□□ 1.41
SNIP1-203ENST00000493916 PHOX2BQ99453 314 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 LMAN1LQ9HAT1 526 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 CYLDQ9NQC7 956 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 TSPAN16Q9UKR8 245 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 PCDHB4Q9Y5E5 795 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 F5P12259 2224 aa23.86■■□□□ 1.41
SNIP1-203ENST00000493916 TLR5O60602 858 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 CD19P15391 556 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 NBL1P41271 181 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 PON2Q15165 354 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 RAB41Q5JT25 222 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 DGKKQ5KSL6 1271 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 MAMSTRQ6ZN01 415 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 RRAGAQ7L523 313 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 FAM114A1Q8IWE2 563 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 CFAP97Q9P2B7 532 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 FBXO4Q9UKT5 387 aa23.85■■□□□ 1.41
SNIP1-203ENST00000493916 GTPBP10A4D1E9 387 aaKnown RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 PROB1E7EW31 1015 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 O00370 1275 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 TRDMT1O14717 391 aaKnown RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 SLC9A3R1O14745 358 aaPredicted RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 XPO1O14980 1071 aaKnown RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 LAMTOR5O43504 91 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 NFATC1O95644 943 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 HOXD11P31277 338 aaPredicted RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 PSEN1P49768 467 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 ZNF132P52740 706 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 BST2Q10589 180 aaKnown RBP23.84■■□□□ 1.41
SNIP1-203ENST00000493916 MTAPQ13126 283 aa23.84■■□□□ 1.41
SNIP1-203ENST00000493916 CCINQ13939 588 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms