RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 UBQLN1Q9UMX0 589 aaKnown RBP14.41□□□□□ -0.1
VCP-207ENST00000493886 DNALI1O14645 258 aaPredicted RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 CST8O60676 142 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 TRUB2O95900 331 aaKnown RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 CD48P09326 243 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 PSMC4P43686 418 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 RGS7P49802 495 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 NUGGCQ68CJ6 796 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 C17orf99Q6UX52 265 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 BBS12Q6ZW61 710 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 MYLK4Q86YV6 388 aaPredicted RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 KCTD6Q8NC69 237 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 CMASQ8NFW8 434 aaPredicted RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 PIWIL1Q96J94 861 aaKnown RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 TMEM121Q9BTD3 319 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 FAM49BQ9NUQ9 324 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 NINJ2Q9NZG7 142 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 GJD2Q9UKL4 321 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 C2CD4BA6NLJ0 364 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 PCK1P35558 622 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 RGS2P41220 211 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 OTUD4Q01804 1114 aaKnown RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 SETDB1Q15047 1291 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 TAF5Q15542 800 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 PKDCCQ504Y2 493 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 MFSD5Q6N075 450 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 CYP4F22Q6NT55 531 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 TRNP1Q6NT89 227 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 TAOK1Q7L7X3 1001 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 TTC30AQ86WT1 665 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 OR6B3Q8NGW1 331 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 ACTL9Q8TC94 416 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 KCNV2Q8TDN2 545 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 HSPH1Q92598 858 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 CNPY3Q9BT09 278 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 STMN4Q9H169 189 aaPredicted RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 KLK14Q9P0G3 267 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 SAE1Q9UBE0 346 aaPredicted RBP14.4□□□□□ -0.1
VCP-207ENST00000493886 Q9Y3F1 56 aa14.4□□□□□ -0.1
VCP-207ENST00000493886 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 GPS1Q13098 491 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 TNFAIP8L3Q5GJ75 292 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 SH3PXD2AQ5TCZ1 1133 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 PMF1Q6P1K2 205 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 TRPM8Q7Z2W7 1104 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 CYP4X1Q8N118 509 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 ZCCHC9Q8N567 271 aaKnown RBP14.39□□□□□ -0.11
VCP-207ENST00000493886 TTC13Q8NBP0 860 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 MRRFQ96E11 262 aaKnown RBP14.39□□□□□ -0.11
VCP-207ENST00000493886 SH3GL3Q99963 347 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 YIPF2Q9BWQ6 316 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 FOXP3Q9BZS1 431 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 C17orf102A2RUQ5 167 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 SGK1O00141 431 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 GRAP2O75791 330 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 UBOX5O94941 541 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 MPP2Q14168 576 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 SOWAHAQ2M3V2 549 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 PIGWQ7Z7B1 504 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 UNC93AQ86WB7 457 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 RELL1Q8IUW5 271 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 SRRM1Q8IYB3 904 aaKnown RBP14.39□□□□□ -0.11
VCP-207ENST00000493886 PEBP4Q96S96 227 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 APBA2Q99767 749 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 KATNAL1Q9BW62 490 aa14.39□□□□□ -0.11
VCP-207ENST00000493886 FRMD8P1Q9BZ68 369 aaPredicted RBP14.39□□□□□ -0.11
VCP-207ENST00000493886 IFNB1P01574 187 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 CD4P01730 458 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 ELF1P32519 619 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 RPS6KA3P51812 740 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 C15orf59Q2T9L4 293 aaPredicted RBP14.38□□□□□ -0.11
VCP-207ENST00000493886 LACTB2Q53H82 288 aaPredicted RBP14.38□□□□□ -0.11
VCP-207ENST00000493886 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 UBXN11Q5T124 520 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 VSTM1Q6UX27 236 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 KIF2BQ8N4N8 673 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 CCDC63Q8NA47 563 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 RBM15Q96T37 977 aaKnown RBP eCLIP14.38□□□□□ -0.112e-6■■□□□ 12.7
VCP-207ENST00000493886 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 PCDH9Q9HC56 1237 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 HESX1Q9UBX0 185 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 PDCD11Q14690 1871 aaKnown RBP14.38□□□□□ -0.11
VCP-207ENST00000493886 PIRO00625 290 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 SETSIPP0DME0 302 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 CRYBB1P53674 252 aaPredicted RBP14.38□□□□□ -0.11
VCP-207ENST00000493886 XRCC4Q13426 336 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 FSCN1Q16658 493 aaKnown RBP14.38□□□□□ -0.11
VCP-207ENST00000493886 CEP128Q6ZU80 1094 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 RFX6Q8HWS3 928 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 SLC35F5Q8WV83 523 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 N4BP2L2Q92802 583 aaPredicted RBP14.38□□□□□ -0.11
VCP-207ENST00000493886 SERPINB12Q96P63 405 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 DPEP3Q9H4B8 488 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 A8MXQ7 604 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 BRAFP15056 766 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 KCNJ2P63252 427 aa14.38□□□□□ -0.11
VCP-207ENST00000493886 ELF3P78545 371 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms