RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PKN2Q16513 984 aaKnown RBP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 GOLGA7BQ2TAP0 167 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 GALNTL6Q49A17 601 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 LGSNQ5TDP6 509 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 FAM183BPQ6ZVS7 135 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 ANKRD23Q86SG2 305 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 UNC45BQ8IWX7 931 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 FBXO36Q8NEA4 188 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF398Q8TD17 642 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 PAIP2Q9BPZ3 127 aaKnown RBP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 TACO1Q9BSH4 297 aaKnown RBP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 KLC2Q9H0B6 622 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 UBQLN1Q9UMX0 589 aaKnown RBP10.07□□□□□ -0.8
NPHP3-209ENST00000493732 USH1CQ9Y6N9 552 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 EVPLQ92817 2033 aa10.07□□□□□ -0.8
NPHP3-209ENST00000493732 CLUHO75153 1309 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 NRCAMQ92823 1304 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 MCM3APO60318 1980 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 IQCA1LA6NCM1 817 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 PDHXO00330 501 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 TRDMT1O14717 391 aaKnown RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 TYROBPO43914 113 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 MGRN1O60291 552 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 ATP2C2O75185 946 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 MMP3P08254 477 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 ADCYAP1R1P41586 468 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 NR2C2P49116 596 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 GDF10P55107 478 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 BCAR1P56945 870 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 WDR4P57081 412 aaKnown RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 GPX6P59796 221 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 ORC1Q13415 861 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 FASTKD3Q14CZ7 662 aaKnown RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 BBS9Q3SYG4 887 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 PKDCCQ504Y2 493 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 FYB2Q5VWT5 728 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 MAP1SQ66K74 1059 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 BZW1Q7L1Q6 419 aaKnown RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 DPH6Q7L8W6 267 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 CATSPER4Q7RTX7 472 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 PNMA8AQ86V59 439 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 ANKMY2Q8IV38 441 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 CDKL3Q8IVW4 592 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 SLC35F5Q8WV83 523 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF560Q96MR9 790 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 PAFAH2Q99487 392 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 KATNBL1Q9H079 304 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 VPS11Q9H270 941 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 PNPLA8Q9NP80 782 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 TXLNGQ9NUQ3 528 aa10.06□□□□□ -0.8
NPHP3-209ENST00000493732 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 SAE1Q9UBE0 346 aaPredicted RBP10.06□□□□□ -0.8
NPHP3-209ENST00000493732 SMIM35A0A1B0GVV1 85 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 GOLGA8MH3BSY2 632 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SNAI1O95863 264 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ZBED1O96006 694 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 CD48P09326 243 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FAM163BP0C2L3 166 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF286BP0CG31 522 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 KRT4P19013 534 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 MAGEA6P43360 314 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FKBP1BP68106 108 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ZBTB6Q15916 424 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 CCDC14Q49A88 953 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FNBP1LQ5T0N5 605 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 MARCH8Q5T0T0 291 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 C9orf131Q5VYM1 1079 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SLC9A4Q6AI14 798 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 OLFML1Q6UWY5 402 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PLD5Q8N7P1 536 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 MCUQ8NE86 351 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FAF2Q96CS3 445 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ZBTB10Q96DT7 871 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SNX27Q96L92 541 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FERMT1Q9BQL6 677 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 TRIM6Q9C030 488 aaPredicted RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 MLXIPLQ9NP71 852 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ABCF3Q9NUQ8 709 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PHTF1Q9UMS5 762 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SNX9Q9Y5X1 595 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 PLXNA1Q9UIW2 1896 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 A6NJR5 290 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 HNRNPCL1O60812 293 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SPAG7O75391 227 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 CSDE1O75534 798 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 FAM155BO75949 473 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 UBOX5O94941 541 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 NPTXRO95502 500 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 MT-ND3P03897 115 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 INHBAP08476 426 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SSTR1P30872 391 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 RASSF2P50749 326 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 BCAT1P54687 386 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SLC8A3P57103 927 aa10.05□□□□□ -0.8
NPHP3-209ENST00000493732 SARNPP82979 210 aaKnown RBP10.05□□□□□ -0.8
NPHP3-209ENST00000493732 ZNF200P98182 395 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms