RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 MBD1Q9UIS9 605 aaPredicted RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
SAMM50-205ENST00000493621 PCNX2A6NKB5 2137 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TCRBV21S2A2A0A5A6 115 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.12□□□□□ -0.31
SAMM50-205ENST00000493621 CLDN5O00501 218 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TACC1O75410 805 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 ENGP17813 658 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TNNI1P19237 187 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 PDCP20941 246 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 HOXD13P35453 343 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 GRIA2P42262 883 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TNFRSF4P43489 277 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TNNC1P63316 161 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 MAP7D1Q3KQU3 841 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 HSF5Q4G112 596 aaPredicted RBP13.12□□□□□ -0.31
SAMM50-205ENST00000493621 LY6G5CQ5SRR4 150 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 LYSMD4Q5XG99 296 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 KIAA1211LQ6NV74 962 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 SYT12Q8IV01 421 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TMEM121BQ9BXQ6 578 aaPredicted RBP13.12□□□□□ -0.31
SAMM50-205ENST00000493621 B3GNT5Q9BYG0 378 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 ELOVL4Q9GZR5 314 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 KIAA1586Q9HCI6 787 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 TBC1D14Q9P2M4 693 aa13.12□□□□□ -0.31
SAMM50-205ENST00000493621 A0A0A0MRY4 1105 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 E2F8A0AVK6 867 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 A8MXQ7 604 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 COCHO43405 550 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 ADAM23O75077 832 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 YWHAQP27348 245 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 GAD2Q05329 585 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 CUL4AQ13619 759 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 BYSLQ13895 437 aaKnown RBP13.11□□□□□ -0.31
SAMM50-205ENST00000493621 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 SNRNP35Q16560 246 aaKnown RBP13.11□□□□□ -0.31
SAMM50-205ENST00000493621 WDR72Q3MJ13 1102 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 NUP93Q8N1F7 819 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 DEFB119Q8N690 84 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 NAT16Q8N8M0 369 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 PDZD8Q8NEN9 1154 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 GATA6Q92908 595 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 CCDC127Q96BQ5 260 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 USP28Q96RU2 1077 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 CGRRF1Q99675 332 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 SLC32A1Q9H598 525 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 NXF1Q9UBU9 619 aaKnown RBP13.11□□□□□ -0.31
SAMM50-205ENST00000493621 SH3BP1Q9Y3L3 701 aa13.11□□□□□ -0.31
SAMM50-205ENST00000493621 SPEGQ15772 3267 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 TMEM8BA6NDV4 472 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 CLIC2O15247 247 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 RTN3O95197 1032 aaPredicted RBP13.1□□□□□ -0.31
SAMM50-205ENST00000493621 CFIP05156 583 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 FAM163BP0C2L3 166 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 ITPKAP23677 461 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 CYP2J2P51589 502 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 CYP24A1Q07973 514 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 TRPC3Q13507 836 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 PSMD6Q15008 389 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 BTBD8Q5XKL5 378 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 SLC23A3Q6PIS1 610 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 ZFRQ96KR1 1074 aaKnown RBP13.1□□□□□ -0.31
SAMM50-205ENST00000493621 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 TNMDQ9H2S6 317 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 FSCN3Q9NQT6 498 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 AGPAT3Q9NRZ7 376 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
SAMM50-205ENST00000493621 PILRBQ9UKJ0 227 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 CACNA1EQ15878 2313 aa13.1□□□□□ -0.31
SAMM50-205ENST00000493621 ASPMQ8IZT6 3477 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 PCDH15Q96QU1 1955 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 SPAARA0A1B0GVQ0 90 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 AP5Z1O43299 807 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 HYAL3O43820 417 aaPredicted RBP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 TULP3O75386 442 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 IRF1P10914 325 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 SYT1P21579 422 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 DPP6P42658 865 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 WASP42768 502 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 MYL6P60660 151 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ASIC1P78348 528 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ANO4Q32M45 955 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 SPDYCQ5MJ68 293 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 C10orf76Q5T2E6 689 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 EPM2AIP1Q7L775 607 aaPredicted RBP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 BBS7Q8IWZ6 715 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ETFBKMTQ8IXQ9 262 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
SAMM50-205ENST00000493621 SCAMP5Q8TAC9 235 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 ZNF507Q8TCN5 953 aa13.09□□□□□ -0.31
SAMM50-205ENST00000493621 OVCA2Q8WZ82 227 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms