RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 AVILO75366 819 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 TNFAIP8O95379 198 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 PSMD7P51665 324 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 HDAC4P56524 1084 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 SNRNP35Q16560 246 aaKnown RBP12.17□□□□□ -0.46
HDAC4-210ENST00000493582 TEX44Q53QW1 395 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 SPOCD1Q6ZMY3 1216 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 GALNT4Q8N4A0 578 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 FBXL13Q8NEE6 735 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 XPNPEP1Q9NQW7 623 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 NHSQ6T4R5 1651 aa12.17□□□□□ -0.46
HDAC4-210ENST00000493582 F8VP50 259 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 LYPLA1O75608 230 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 CIITAP33076 1130 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 RPL22P35268 128 aaKnown RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ENTPD1P49961 510 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 OXCT1P55809 520 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 BMPR2Q13873 1038 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 C16orf72Q14CZ0 275 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 TBCCQ15814 346 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 RSPH3Q86UC2 560 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PPM1NQ8N819 430 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ACCSQ96QU6 501 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 SENP7Q9BQF6 1050 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 CORO1BQ9BR76 489 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 TMEM206Q9H813 350 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 FOXD2O60548 495 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PSMD10O75832 226 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ITGAVP06756 1048 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 WEE2P0C1S8 567 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 COL6A2P12110 1019 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PORP16435 677 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 GPC3P51654 580 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 BASP1P80723 227 aaKnown RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ANKDD1AQ495B1 522 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 GRAMD4Q6IC98 578 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PADI6Q6TGC4 694 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PQLC1Q8N2U9 271 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 JADE3Q92613 823 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 LXNQ9BS40 222 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 AMNQ9BXJ7 453 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 BTG4Q9NY30 223 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 SF3B1O75533 1304 aaKnown RBP eCLIP12.16□□□□□ -0.462e-6■■■■■ 141.6
HDAC4-210ENST00000493582 DDX39AO00148 427 aaKnown RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 GAS7O60861 476 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ZNF24P17028 368 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 MSX2P35548 267 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 GSTM4Q03013 218 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 CYTH1Q15438 398 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 MFSD14BQ5SR56 506 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 LIN9Q5TKA1 542 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 Q6ZNX1 250 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 SV2AQ7L0J3 742 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PATL1Q86TB9 770 aaKnown RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ACTRT2Q8TDY3 377 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 PPP4R1Q8TF05 950 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 Q9H521 79 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 DDX4Q9NQI0 724 aaKnown RBP12.16□□□□□ -0.46
HDAC4-210ENST00000493582 SIRPGQ9P1W8 387 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ZNRF3Q9ULT6 936 aa12.16□□□□□ -0.46
HDAC4-210ENST00000493582 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 A0A0B4J269 797 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 SIN3BO75182 1162 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 THRAP10827 490 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 NELFEP18615 380 aaKnown RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 SHMT1P34896 483 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 CD151P48509 253 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 NR1H2P55055 460 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 MTTPP55157 894 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 CDKL1Q00532 357 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 TUBB3Q13509 450 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 SLC10A5Q5PT55 438 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 HAUS6Q7Z4H7 955 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 PCGF5Q86SE9 256 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 AHI1Q8N157 1196 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 ACTL9Q8TC94 416 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 NKD2Q969F2 451 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 ZNF696Q9H7X3 374 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 RRN3Q9NYV6 651 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 hCG_1818297A0A087WSY0 165 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 CXorf49A8MYA2 514 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 E7ESA3 106 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 SLC16A4O15374 487 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 ITM2AO43736 263 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 UGT1A9O60656 530 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 TOM1L1O75674 476 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 FAM58BPP0C7Q3 252 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 ALOX15P16050 662 aaPredicted RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 ITGAXP20702 1163 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 PRELPP51888 382 aa12.15□□□□□ -0.46
HDAC4-210ENST00000493582 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 OTUD4Q01804 1114 aaKnown RBP12.15□□□□□ -0.46
HDAC4-210ENST00000493582 STX3Q13277 289 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms