RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 SPAG1Q07617 926 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 PON2Q15165 354 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 ZNF77Q15935 545 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 DTHD1Q6ZMT9 781 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 SND1Q7KZF4 910 aaKnown RBP eCLIP7.56□□□□□ -1.2
CAB39-206ENST00000493540 ITIH5Q86UX2 942 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 RASSF3Q86WH2 238 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 NT5DC4Q86YG4 428 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 CMTM8Q8IZV2 173 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 KIAA1958Q8N8K9 716 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 CSGALNACT1Q8TDX6 532 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 DDX1Q92499 740 aaKnown RBP7.56□□□□□ -1.2
CAB39-206ENST00000493540 EDEM1Q92611 657 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 USP13Q92995 863 aaPredicted RBP7.56□□□□□ -1.2
CAB39-206ENST00000493540 HVCN1Q96D96 273 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 LPIN3Q9BQK8 851 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 TMEM206Q9H813 350 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 RXFP3Q9NSD7 469 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 DSEQ9UL01 958 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 HCN2Q9UL51 889 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 FNDC3AQ9Y2H6 1198 aaKnown RBP7.56□□□□□ -1.2
CAB39-206ENST00000493540 KNTC1P50748 2209 aa7.56□□□□□ -1.2
CAB39-206ENST00000493540 PLXNA2O75051 1894 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 COL5A1P20908 1838 aaPredicted RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 DOCK9Q9BZ29 2069 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 ATMQ13315 3056 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 NPHP3-ACAD11A0A0J9YXS1 232 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 FRMD3A2A2Y4 597 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 TISP43B9A030 160 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 GABRDO14764 452 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 FZD6O60353 706 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 EIF5BO60841 1220 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 HARSP12081 509 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 BMP4P12644 408 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 GRNP28799 593 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 ALDH1A3P47895 512 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 TUFMP49411 452 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 RAD51AP2Q09MP3 1159 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 TMEM132DQ14C87 1099 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 LPAL2Q16609 132 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 ST3GAL2Q16842 350 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 PLK5Q496M5 336 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 C8orf34Q49A92 452 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 CFAP221Q4G0U5 840 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 SLC39A12Q504Y0 691 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 GPR158Q5T848 1215 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 PEAR1Q5VY43 1037 aaPredicted RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 ERICH6BQ5W0A0 696 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 SYT13Q7L8C5 426 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 CEP295NLQ96MC4 621 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 DUSP9Q99956 384 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 TCHPQ9BT92 498 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 SLITRK6Q9H5Y7 841 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 PARVGQ9HBI0 331 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 TMLHEQ9NVH6 421 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 GCNT4Q9P109 453 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 RAB23Q9ULC3 237 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 KCNMB2Q9Y691 235 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 PTPRQQ9UMZ3 2332 aa7.55□□□□□ -1.2
CAB39-206ENST00000493540 SETXQ7Z333 2677 aaKnown RBP7.55□□□□□ -1.2
CAB39-206ENST00000493540 ANKRD63C9JTQ0 380 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 K7ENM7 598 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 RPP40O75818 363 aaKnown RBP7.54□□□□□ -1.2
CAB39-206ENST00000493540 PDGFAP04085 211 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 MPLP40238 635 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 TAF6P49848 677 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 LIG4P49917 911 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 GRIN1Q05586 938 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 RUNX3Q13761 415 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 SF3A2Q15428 464 aaKnown RBP7.54□□□□□ -1.2
CAB39-206ENST00000493540 FBXO43Q4G163 708 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 ARHGAP15Q53QZ3 475 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 RNFT1Q5M7Z0 435 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 PMS2CLQ68D20 193 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 NAIF1Q69YI7 327 aaPredicted RBP7.54□□□□□ -1.2
CAB39-206ENST00000493540 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 PRR23BQ6ZRT6 265 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 CACNA2D4Q7Z3S7 1137 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 KBTBD6Q86V97 674 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 MON1AQ86VX9 555 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 BRSK2Q8IWQ3 736 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 LRRC52Q8N7C0 313 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 OLIG1Q8TAK6 271 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 RAD54LQ92698 747 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 DNAJC19Q96DA6 116 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 FUBP3Q96I24 572 aaKnown RBP eCLIP7.54□□□□□ -1.2
CAB39-206ENST00000493540 SLC22A12Q96S37 553 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 TTLL2Q9BWV7 592 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 RPF1Q9H9Y2 349 aaKnown RBP7.54□□□□□ -1.2
CAB39-206ENST00000493540 FBRSL1Q9HCM7 1045 aaKnown RBP7.54□□□□□ -1.2
CAB39-206ENST00000493540 OLFML3Q9NRN5 406 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 TDP1Q9NUW8 608 aa7.54□□□□□ -1.2
CAB39-206ENST00000493540 GDAP2Q9NXN4 497 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms