RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ACAD10Q6JQN1 1059 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 FAM183BPQ6ZVS7 135 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 RTL10Q7L3V2 364 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 TMTC1Q8IUR5 882 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 SCUBE3Q8IX30 993 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 ING5Q8WYH8 240 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 KCTD13Q8WZ19 329 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 FAM149B1Q96BN6 582 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 SLITRK1Q96PX8 696 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 SLC4A5Q9BY07 1137 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 UBXN6Q9BZV1 441 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 ATXN3LQ9H3M9 355 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 TRPC7Q9HCX4 862 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
HPS4-216ENST00000493455 CHORDC1Q9UHD1 332 aaPredicted RBP16.57■□□□□ 0.24
HPS4-216ENST00000493455 NOTCH4Q99466 2003 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 DENND4CQ5VZ89 1909 aa16.57■□□□□ 0.24
HPS4-216ENST00000493455 REV3LO60673 3130 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 A0A1W2PRU2 124 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 GRAP2O75791 330 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 FTLP02792 175 aaPredicted RBP16.56■□□□□ 0.24
HPS4-216ENST00000493455 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
HPS4-216ENST00000493455 SNX16P57768 344 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 CDK17Q00537 523 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 RAB41Q5JT25 222 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 ALKBH5Q6P6C2 394 aaKnown RBP16.56■□□□□ 0.24
HPS4-216ENST00000493455 GET4Q7L5D6 327 aaPredicted RBP16.56■□□□□ 0.24
HPS4-216ENST00000493455 GPR149Q86SP6 731 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 CMASQ8NFW8 434 aaPredicted RBP16.56■□□□□ 0.24
HPS4-216ENST00000493455 STK32AQ8WU08 396 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 HLA-CQ95604 372 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 C18orf8Q96DM3 657 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 TCEAL4Q96EI5 215 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 PDLIM2Q96JY6 352 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 PRDM6Q9NQX0 595 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 MYO1AQ9UBC5 1043 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 NAGPAQ9UK23 515 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 ANAPC1Q9H1A4 1944 aa16.56■□□□□ 0.24
HPS4-216ENST00000493455 BRWD1Q9NSI6 2320 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 PAPSS1O43252 624 aaPredicted RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 NRDCO43847 1150 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 RTN2O75298 545 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 CALB1P05937 261 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 SP100P23497 879 aaPredicted RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 DAOAP59103 153 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 RNASE9P60153 205 aaKnown RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 ITIH3Q06033 890 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 SLC18A3Q16572 532 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 SLC5A9Q2M3M2 681 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 ATAT1Q5SQI0 421 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 FAM102AQ5T9C2 384 aaPredicted RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 RAD9BQ6WBX8 426 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 TMC8Q8IU68 726 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 TMEM139Q8IV31 216 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 LRRC8AQ8IWT6 810 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 ZNF653Q96CK0 615 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 TRMT2BQ96GJ1 504 aaKnown RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 PIWIL1Q96J94 861 aaKnown RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 CEP295NLQ96MC4 621 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 ADAM7Q9H2U9 754 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 SLITRK6Q9H5Y7 841 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 TRPM5Q9NZQ8 1165 aa16.55■□□□□ 0.24
HPS4-216ENST00000493455 MRPS23Q9Y3D9 190 aaKnown RBP16.55■□□□□ 0.24
HPS4-216ENST00000493455 CLUHO75153 1309 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 YJEFN3A6XGL0 299 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 E7ENQ6 273 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 FBXO21O94952 628 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 GJB6O95452 261 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 CEBPBP17676 345 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 MMP8P22894 467 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 FSHRP23945 695 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 CDC25CP30307 473 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 CCR2P41597 374 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 YWHAGP61981 247 aaKnown RBP eCLIP16.54■□□□□ 0.24
HPS4-216ENST00000493455 MRPS5P82675 430 aaKnown RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 COL19A1Q14993 1142 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 SPA17Q15506 151 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 TEAD2Q15562 447 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 ASTE1Q2TB18 679 aaPredicted RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 BTBD8Q5XKL5 378 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 HFE2Q6ZVN8 426 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 GAREM2Q75VX8 874 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 MON1BQ7L1V2 547 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 TMEM110Q86TL2 294 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 XYLT1Q86Y38 959 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 PHF13Q86YI8 300 aaPredicted RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 MCOLN2Q8IZK6 566 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 SHKBP1Q8TBC3 707 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 EDEM1Q92611 657 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 MRPS31Q92665 395 aaKnown RBP16.54■□□□□ 0.24
HPS4-216ENST00000493455 RIPOR3Q96MK2 946 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 DESI2Q9BSY9 194 aa16.54■□□□□ 0.24
HPS4-216ENST00000493455 TTLL2Q9BWV7 592 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms