RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 IKZF4Q9H2S9 585 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 SNX25Q9H3E2 840 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 TMEM74BQ9NUR3 256 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 CFAP97Q9P2B7 532 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 DEC1Q9P2X7 70 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 SUSD2Q9UGT4 822 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 STARD13Q9Y3M8 1113 aa11.71□□□□□ -0.53
SNRNP200-207ENST00000493271 WDFY3Q8IZQ1 3526 aa11.71□□□□□ -0.54
SNRNP200-207ENST00000493271 TNRC6BQ9UPQ9 1833 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 ATP8B3O60423 1300 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 A0A1W2PQD8 194 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 GOLGA8IPA6NC78 632 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 TBC1D3BA6NDS4 549 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 GOLGA8JA6NMD2 632 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 HCRTO43612 131 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 TOP3BO95985 862 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 ABL1P00519 1130 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 IDEP14735 1019 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 SLC6A11P48066 632 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 RPL6Q02878 288 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 SNX30Q5VWJ9 437 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 ARMCX6Q7L4S7 300 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 HS2ST1Q7LGA3 356 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 ETFBKMTQ8IXQ9 262 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 CCDC65Q8IXS2 484 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 NUP93Q8N1F7 819 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 PHTF2Q8N3S3 785 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 ZNF513Q8N8E2 541 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 LRRC27Q9C0I9 530 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 FAM124BQ9H5Z6 455 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 CAPN10Q9HC96 672 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 DNAAF2Q9NVR5 837 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 COMMD8Q9NX08 183 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 SMPD4Q9NXE4 827 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 MBD1Q9UIS9 605 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 SH3BP1Q9Y3L3 701 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 SRPRBQ9Y5M8 271 aaKnown RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 MORC2Q9Y6X9 1032 aaPredicted RBP11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 PKD1L2Q7Z442 2459 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 PTPRDP23468 1912 aa11.7□□□□□ -0.54
SNRNP200-207ENST00000493271 ARHGAP33O14559 1287 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 ADAM23O75077 832 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 STAU1O95793 577 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 PDGFRBP09619 1106 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 HOXB2P14652 356 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 ITPKAP23677 461 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 YWHAQP27348 245 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 NTSR1P30989 418 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 CASP5P51878 434 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 SNRPFP62306 86 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 TNNC1P63316 161 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 RING1Q06587 406 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 ZNF33AQ06730 810 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 MDH1BQ5I0G3 518 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 LY6G5CQ5SRR4 150 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 HECTD3Q5T447 861 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 SDE2Q6IQ49 451 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 KIAA1211LQ6NV74 962 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 TERB1Q8NA31 727 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 ZSWIM2Q8NEG5 633 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 OR5B17Q8NGF7 314 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 OR6B3Q8NGW1 331 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 NOC3LQ8WTT2 800 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 GTPBP2Q9BX10 602 aaKnown RBP11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 ZDHHC5Q9C0B5 715 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 PCIF1Q9H4Z3 704 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 PANK4Q9NVE7 773 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 KLK13Q9UKR3 277 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
SNRNP200-207ENST00000493271 AKAP13Q12802 2813 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 SPAARA0A1B0GVQ0 90 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 TULP3O75386 442 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 GNSP15586 552 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 PTPN1P18031 435 aaKnown RBP11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 GABRG2P18507 467 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 PDCP20941 246 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 ATICP31939 592 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 STAT6P42226 847 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 KDSRQ06136 332 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 SYCP2LQ5T4T6 812 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 EMC10Q5UCC4 262 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 USP49Q70CQ1 688 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 RAB44Q7Z6P3 723 aaPredicted RBP11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 C12orf40Q86WS4 652 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 PROSER1Q86XN7 944 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 MINDY1Q8N5J2 469 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 B3GALNT2Q8NCR0 500 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 TNIP3Q96KP6 325 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 XPO6Q96QU8 1125 aaKnown RBP11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 SPHK2Q9NRA0 654 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 HSPBP1Q9NZL4 362 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 FBXO2Q9UK22 296 aaPredicted RBP11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 DMXL2Q8TDJ6 3036 aa11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 ASCC3Q8N3C0 2202 aaKnown RBP11.68□□□□□ -0.54
SNRNP200-207ENST00000493271 PTPRJQ12913 1337 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms