RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 CELF5Q8N6W0 485 aaKnown RBP13.48□□□□□ -0.25
CLIP2-209ENST00000493166 RSPRY1Q96DX4 576 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 SLC22A12Q96S37 553 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 ZSWIM1Q9BR11 485 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 UBXN6Q9BZV1 441 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 BRD9Q9H8M2 597 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 KIF9Q9HAQ2 790 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 SLC2A4RGQ9NR83 387 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
CLIP2-209ENST00000493166 TDP1Q9NUW8 608 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 OBP2AQ9NY56 170 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 CHORDC1Q9UHD1 332 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-209ENST00000493166 SCML2Q9UQR0 700 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 KMT2EQ8IZD2 1858 aa13.48□□□□□ -0.25
CLIP2-209ENST00000493166 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 TULP2O00295 520 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 PNMA6AP0CW24 399 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 GDI1P31150 447 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 PLA2G4AP47712 749 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 PFKPQ01813 784 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 PTK2Q05397 1052 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 DRAP1Q14919 205 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 SYCP1Q15431 976 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 FILIP1LQ4L180 1135 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 PKDCCQ504Y2 493 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 TMEM31Q5JXX7 168 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 HECTD3Q5T447 861 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 SNX30Q5VWJ9 437 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 SMYD5Q6GMV2 418 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 TTC16Q8NEE8 873 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 BPIFB1Q8TDL5 484 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 USP13Q92995 863 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 SECISBP2LQ93073 1101 aaKnown RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 GANQ9H2C0 597 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 LRRC4Q9HBW1 653 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 ACP6Q9NPH0 428 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 FAM207AQ9NSI2 230 aaPredicted RBP13.47□□□□□ -0.25
CLIP2-209ENST00000493166 CCL26Q9Y258 94 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 SIK3Q9Y2K2 1263 aa13.47□□□□□ -0.25
CLIP2-209ENST00000493166 ZNF263O14978 683 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 GPR37L1O60883 481 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 OAS1P00973 400 aaKnown RBP13.46□□□□□ -0.25
CLIP2-209ENST00000493166 SERPINC1P01008 464 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 ZDHHC11BP0C7U3 371 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 TUBP50607 506 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 TKTL1P51854 596 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 FCHO2Q0JRZ9 810 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 ADIGQ0VDE8 80 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 RAB41Q5JT25 222 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 CCDC186Q7Z3E2 898 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 SIX6OS1Q8N1H7 587 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 NEK11Q8NG66 645 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 IRF7Q92985 503 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 ASIC4Q96FT7 647 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 LRRC3BQ96PB8 259 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 ERGIC2Q96RQ1 377 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 NAA15Q9BXJ9 866 aaKnown RBP13.46□□□□□ -0.25
CLIP2-209ENST00000493166 NACA2Q9H009 215 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 CCSER2Q9H7U1 834 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 C11orf16Q9NQ32 467 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 THG1LQ9NWX6 298 aaKnown RBP13.46□□□□□ -0.25
CLIP2-209ENST00000493166 WNT16Q9UBV4 365 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 CA14Q9ULX7 337 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 DAAM1Q9Y4D1 1078 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 USP3Q9Y6I4 520 aa13.46□□□□□ -0.25
CLIP2-209ENST00000493166 COL4A3Q01955 1670 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 A0A1W2PQH9 124 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 F8VZ95 297 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 COCHO43405 550 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 TLR5O60602 858 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 OLFM2O95897 454 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 MBL2P11226 248 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-209ENST00000493166 PGFP49763 221 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 PSEN1P49768 467 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 RGS7P49802 495 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 BPIFB4P59827 614 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 POLR2FP61218 127 aaKnown RBP13.45□□□□□ -0.26
CLIP2-209ENST00000493166 SLC7A9P82251 487 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 USP4Q13107 963 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 MEA1Q16626 185 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 ARHGAP29Q52LW3 1261 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
CLIP2-209ENST00000493166 DENND1BQ6P3S1 775 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 LRSAM1Q6UWE0 723 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 SIX5Q8N196 739 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 SH3RF2Q8TEC5 729 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 SLC35F5Q8WV83 523 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 KCTD13Q8WZ19 329 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 DNASE1L2Q92874 299 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 ULBP1Q9BZM6 244 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 RNF38Q9H0F5 515 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 MFSD1Q9H3U5 465 aa13.45□□□□□ -0.26
CLIP2-209ENST00000493166 TSPY26PQ9H489 355 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms