RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CACNA2D4Q7Z3S7 1137 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 KIAA1328Q86T90 577 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TTC7BQ86TV6 843 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 MON1AQ86VX9 555 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 LRRC34Q8IZ02 419 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 BBS5Q8N3I7 341 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 IGSF22Q8N9C0 903 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 FAM133AQ8N9E0 248 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 OR10H5Q8NGA6 315 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 KIF18AQ8NI77 898 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 POC1BQ8TC44 478 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 URGCPQ8TCY9 931 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 SCFD2Q8WU76 684 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 BRI3BPQ8WY22 251 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 EXT2Q93063 718 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ZKSCAN4Q969J2 545 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 LRRC39Q96DD0 335 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 FAM120BQ96EK7 910 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 CYFIP2Q96F07 1278 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 RBM41Q96IZ5 413 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 SNX27Q96L92 541 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 CARD14Q9BXL6 1004 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 CD244Q9BZW8 370 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 RAD21L1Q9H4I0 556 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ANTXR1Q9H6X2 564 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TMEM206Q9H813 350 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ZFAND3Q9H8U3 227 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 RC3H2Q9HBD1 1191 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 MRM3Q9HC36 420 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 INTS13Q9NVM9 706 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 SOHLH2Q9NX45 425 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 IL37Q9NZH6 218 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 IPO11Q9UI26 975 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ANAPC5Q9UJX4 755 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TMPRSS11EQ9UL52 423 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PCDHB10Q9UN67 800 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 ERVK-19Q9WJR5 959 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 DLGAP4Q9Y2H0 992 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 R3HDM2Q9Y2K5 976 aaKnown RBP4.43□□□□□ -1.7
BRCA1-220ENST00000492859 KLHL20Q9Y2M5 609 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 TELO2Q9Y4R8 837 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PCDHGA5Q9Y5G8 931 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PCDHA5Q9Y5H7 936 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 DMRT1Q9Y5R6 373 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 PIAS3Q9Y6X2 628 aa4.43□□□□□ -1.7
BRCA1-220ENST00000492859 MAPK8IP3Q9UPT6 1336 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 BAZ1BQ9UIG0 1483 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 MAGEB6P1A0A0J9YX57 407 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SERTM2A0A1B0GWG4 89 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 TTC26A0AVF1 554 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 GOLGA6L10A6NI86 522 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SOBPA7XYQ1 873 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SYT5O00445 386 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 CAPN5O15484 640 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 TLR2O60603 784 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 PLA2G6O60733 806 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 CYTIPO60759 359 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SURF6O75683 361 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 STAU1O95793 577 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 FTCDO95954 541 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 CLPTM1O96005 669 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 TUBB4AP04350 444 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 ASNSP08243 561 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 CELA3AP09093 270 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 ANPEPP15144 967 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 TBXAS1P24557 533 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 TXLNAP40222 546 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 GRM5P41594 1212 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 ME1P48163 572 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 METAP1P53582 386 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 ATXN3P54252 364 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 PRRX1P54821 245 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 ALDH18A1P54886 795 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 OXCT1P55809 520 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SUMO1P63165 101 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 RPP30P78346 268 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 NCBP1Q09161 790 aaKnown RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 ARHGAP19Q14CB8 494 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 NCAPHQ15003 741 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 HERC3Q15034 1050 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 AGERQ15109 404 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 MOGQ16653 247 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 CYP2A13Q16696 494 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 DUSP28Q4G0W2 176 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 PPP6R3Q5H9R7 873 aaPredicted RBP4.42□□□□□ -1.7
BRCA1-220ENST00000492859 GTF2IRD2BQ6EKJ0 949 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SULT6B1Q6IMI4 303 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SLC30A9Q6PML9 568 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 UBE3BQ7Z3V4 1068 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 GTF2IRD2Q86UP8 949 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 C2CD5Q86YS7 1000 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 FAM217AQ8IXS0 508 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 SCML4Q8N228 414 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 MPP5Q8N3R9 675 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 RNF152Q8N8N0 203 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 BANPQ8N9N5 519 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 OR52M1Q8NGK5 317 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 STT3BQ8TCJ2 826 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 CALML6Q8TD86 181 aa4.42□□□□□ -1.7
BRCA1-220ENST00000492859 MAIP1Q8WWC4 291 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms